RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SPOCK3Q9BQ16 436 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 TBC1D2Q9BYX2 928 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 DHX36Q9H2U1 1008 aaKnown RBP6.77□□□□□ -1.33
TRA2B-211ENST00000477939 RETREG1Q9H6L5 497 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 PAK6Q9NQU5 681 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-211ENST00000477939 FOXD4L1Q9NU39 408 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 IRAK4Q9NWZ3 460 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 PI4KBQ9UBF8 816 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 NDUFB9Q9Y6M9 179 aa6.77□□□□□ -1.33
TRA2B-211ENST00000477939 FRMPD3Q5JV73 1810 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 A0A0C4DFX4 3053 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 TIMM44O43615 452 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 PEX10O60683 326 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 GDF11O95390 407 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 SGPL1O95470 568 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 BAG3O95817 575 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 HMGCRP04035 888 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 ASNSP08243 561 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 PLCG2P16885 1265 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 BDNFP23560 247 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 PDE4AP27815 886 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 GCLCP48506 637 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 BACE1P56817 501 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 DYNLL1P63167 89 aaKnown RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 CEP85Q6P2H3 762 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 TRIM74Q86UV6 250 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 TRIM73Q86UV7 250 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 HSCBQ8IWL3 235 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 CCAR1Q8IX12 1150 aaKnown RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 MIGA1Q8NAN2 632 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 CCDC47Q96A33 483 aaKnown RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 COA7Q96BR5 231 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 DEFB118Q96PH6 123 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 HTATIP2Q9BUP3 242 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 WDR18Q9BV38 432 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 CRISPLD2Q9H0B8 497 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 CCDC8Q9H0W5 538 aaPredicted RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 AS3MTQ9HBK9 375 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 TXNRD2Q9NNW7 524 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 TRPV5Q9NQA5 729 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 WDR70Q9NW82 654 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 MORF4L1Q9UBU8 362 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 SAP30BPQ9UHR5 308 aaKnown RBP6.76□□□□□ -1.33
TRA2B-211ENST00000477939 GJD2Q9UKL4 321 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 UNC80Q8N2C7 3258 aa6.76□□□□□ -1.33
TRA2B-211ENST00000477939 ERLIN1O75477 346 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 IDH1O75874 414 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TPM1P09493 284 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SLFN14P0C7P3 912 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SKILP12757 684 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 FOSL1P15407 271 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 CYP7A1P22680 504 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 HOXA7P31268 230 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 PRPHP41219 470 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 HERVK_113P62684 666 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SFSWAPQ12872 951 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TRIM32Q13049 653 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 PABPC4Q13310 644 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TERF2Q15554 542 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 MFSD4BQ5TF39 518 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 MCTP2Q6DN12 878 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 POTEEQ6S8J3 1075 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 MYOCDQ8IZQ8 938 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TXLNBQ8N3L3 684 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 MAGEB6Q8N7X4 407 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 MIPOL1Q8TD10 442 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 DIS3LQ8TF46 1054 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 HDAC7Q8WUI4 952 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 STAG1Q8WVM7 1258 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SREK1Q8WXA9 508 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TRIB2Q92519 343 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 DPF3Q92784 378 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 CDK5RAP3Q96JB5 506 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 ANTXR1Q9H6X2 564 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 PUF60Q9UHX1 559 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 NOL7Q9UMY1 257 aaKnown RBP6.75□□□□□ -1.33
TRA2B-211ENST00000477939 EXOC6BQ9Y2D4 811 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 PCDHGA4Q9Y5G9 962 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 A0A0G2JMZ2 1700 aa6.75□□□□□ -1.33
TRA2B-211ENST00000477939 VCANP13611 3396 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 MYH8P13535 1937 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.74□□□□□ -1.33
TRA2B-211ENST00000477939 C19orf81C9J6K1 198 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 USP17L10C9JJH3 530 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 CAND2O75155 1236 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 GH2P01242 217 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 HLA-DOAP06340 250 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 MSL3P1P0C860 447 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 MNX1P50219 401 aaPredicted RBP6.74□□□□□ -1.33
TRA2B-211ENST00000477939 GYS2P54840 703 aa6.74□□□□□ -1.33
TRA2B-211ENST00000477939 EVX2Q03828 476 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms