RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 NONOQ15233 471 aaKnown RBP eCLIP9.04□□□□□ -0.96
VMA21-203ENST00000477649 ABCB5Q2M3G0 1257 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 WWC2Q6AWC2 1192 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 CIAPIN1Q6FI81 312 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 USP17L2Q6R6M4 530 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 SARM1Q6SZW1 724 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 PIK3AP1Q6ZUJ8 805 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 MTMR8Q96EF0 704 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 PRMT6Q96LA8 375 aaPredicted RBP9.04□□□□□ -0.96
VMA21-203ENST00000477649 AK8Q96MA6 479 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 SH2D4AQ9H788 454 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 TDRD3Q9H7E2 651 aaKnown RBP9.04□□□□□ -0.96
VMA21-203ENST00000477649 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 KCNQ5Q9NR82 932 aa9.04□□□□□ -0.96
VMA21-203ENST00000477649 PSDA5PKW4 1024 aaPredicted RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 SMCO2A6NFE2 343 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 DDTLA6NHG4 134 aaPredicted RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 IKBKBO14920 756 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ZBTB5O15062 677 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 SLC26A4O43511 780 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 CDC25BP30305 580 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ICA1Q05084 483 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 PTGDRQ13258 359 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 NT5DC1Q5TFE4 455 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 MLKLQ8NB16 471 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 DPF2Q92785 391 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 SHISA4Q96DD7 197 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 CSRNP1Q96S65 589 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 CUEDC2Q9H467 287 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 MAGEF1Q9HAY2 307 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ARHGEF10LQ9HCE6 1279 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ZNF277Q9NRM2 450 aaPredicted RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 PLA2G2EQ9NZK7 142 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ZNF70Q9UC06 446 aaPredicted RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 PCDHB8Q9UN66 801 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 PCDHA6Q9UN73 950 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 PCDHA8Q9Y5H6 950 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 MYH6P13533 1939 aa9.03□□□□□ -0.96
VMA21-203ENST00000477649 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
VMA21-203ENST00000477649 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 hCG_1642624A0A1W2PR95 340 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 ESPNB1AK53 854 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 PLA2G6O60733 806 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 RAD17O75943 681 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 ADCY5O95622 1261 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 PTMAP06454 111 aaKnown RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 GCFC2P16383 781 aaKnown RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 MSNP26038 577 aaKnown RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 SLC1A4P43007 532 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 ADCY7P51828 1080 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 MAP3K10Q02779 954 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 CXCL9Q07325 125 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 TCP10Q12799 353 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 IQCB1Q15051 598 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 POSTNQ15063 836 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 CCDC96Q2M329 555 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 SLFN13Q68D06 897 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 BTNL9Q6UXG8 535 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 NEK8Q86SG6 692 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 LRRC47Q8N1G4 583 aaKnown RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
VMA21-203ENST00000477649 ZBED3Q96IU2 234 aaPredicted RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 PIGSQ96S52 555 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 RAB34Q9BZG1 259 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 PDGFDQ9GZP0 370 aaPredicted RBP9.02□□□□□ -0.97
VMA21-203ENST00000477649 CSRNP2Q9H175 543 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 DNAJC25Q9H1X3 360 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 DNAJC18Q9H819 358 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
VMA21-203ENST00000477649 RIC8AQ9NPQ8 531 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 PNMA2Q9UL42 364 aa9.02□□□□□ -0.97
VMA21-203ENST00000477649 SCN9AQ15858 1988 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 POLR2DO15514 142 aaKnown RBP9.01□□□□□ -0.97
VMA21-203ENST00000477649 ZBTB7AO95365 584 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 GOLGA8HP0CJ92 632 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 ATP2B1P20020 1258 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
VMA21-203ENST00000477649 MKRN3Q13064 507 aaKnown RBP9.01□□□□□ -0.97
VMA21-203ENST00000477649 AP3B2Q13367 1082 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 ZNF174Q15697 407 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 SLC35G1Q2M3R5 365 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 ZFPM1Q8IX07 1006 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 ADGRF4Q8IZF3 695 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 SPATA20Q8TB22 786 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 CUL5Q93034 780 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
VMA21-203ENST00000477649 MRFAP1L1Q96HT8 127 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms