RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CLIP2Q9UDT6 1046 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 RAPGEFL1Q9UHV5 662 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 TBX21Q9UL17 535 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 ADAMTS5Q9UNA0 930 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 RIPK3Q9Y572 518 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 ELP1O95163 1332 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 ZBED9Q6R2W3 1325 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 LCTP09848 1927 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ARVCFO00192 962 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ADCY6O43306 1168 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 RAB11FIP3O75154 756 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 PRDM1O75626 825 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 NDUFB10O96000 172 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 APPP05067 770 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ATP5JP18859 108 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 CCL23P55773 120 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 RAB30Q15771 203 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 TMEM240Q5SV17 173 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ARMCX2Q7L311 632 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 OTOP2Q7RTS6 562 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ZNF444Q8N0Y2 327 aaPredicted RBP7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 KLHDC9Q8NEP7 349 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 REPS2Q8NFH8 660 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 HAUS7Q99871 368 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 PUS7LQ9H0K6 701 aaKnown RBP7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 TSPYL2Q9H2G4 693 aaPredicted RBP7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 ABHD16BQ9H3Z7 469 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 SLC28A3Q9HAS3 691 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 COG6Q9Y2V7 657 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 SPTBN5Q9NRC6 3674 aaKnown RBP7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
RTFDC1-206ENST00000477485 FGBP02675 491 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 MS4A1P11836 297 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 RASA1P20936 1047 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 CST5P28325 142 aaPredicted RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 GJA9P57773 515 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 MRPS5P82675 430 aaKnown RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 TNFAIP2Q03169 654 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 UBE3CQ15386 1083 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 PPP2R2DQ66LE6 453 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 CXCL17Q6UXB2 119 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 MAMDC4Q6UXC1 1216 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 C16orf59Q7L2K0 433 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 EEPD1Q7L9B9 569 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 FAM126BQ8IXS8 530 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 RPAP2Q8IXW5 612 aaPredicted RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 ATXN2LQ8WWM7 1075 aaKnown RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 ASB2Q96Q27 587 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 UHRF1Q96T88 793 aaPredicted RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 AP5M1Q9H0R1 490 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 HIPK3Q9H422 1215 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 IL23AQ9NPF7 189 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 FBXO40Q9UH90 709 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 DDX19BQ9UMR2 479 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 COL4A4P53420 1690 aaPredicted RBP7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 TTC28Q96AY4 2481 aa7.97□□□□□ -1.13
RTFDC1-206ENST00000477485 MYH6P13533 1939 aa7.96□□□□□ -1.13
RTFDC1-206ENST00000477485 DNAJC25-GNG10A0A024R161 153 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 TMEM232C9JQI7 657 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 SMARCA5O60264 1052 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 ZEB2O60315 1214 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 TSPY3P0CV98 308 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 TSPY8P0CW00 308 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 ALAS1P13196 640 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CDK7P50613 346 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 RABGGTBP53611 331 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CNTN2Q02246 1040 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 AKNAD1Q5T1N1 836 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 SLFN13Q68D06 897 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CCSAPQ6IQ19 270 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 ZNF467Q7Z7K2 595 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 TLK2Q86UE8 772 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CHST13Q8NET6 341 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CEP95Q96GE4 821 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 LRRCC1Q9C099 1032 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 ACAD9Q9H845 621 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC38A10Q9HBR0 1119 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 ZNF287Q9HBT7 754 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 RNF146Q9NTX7 359 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 CXXC1Q9P0U4 656 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 NYAP2Q9P242 653 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 FEM1BQ9UK73 627 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 DDX49Q9Y6V7 483 aaKnown RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 TRIP12Q14669 1992 aaPredicted RBP7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 UMODL1Q5DID0 1318 aa7.96□□□□□ -1.14
RTFDC1-206ENST00000477485 GSG1L2A8MUP6 293 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 DYNC1LI2O43237 492 aaPredicted RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 GPAA1O43292 621 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 TTLL1O95922 423 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 BMP3P12645 472 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 MYOGP15173 224 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 PTGS1P23219 599 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 STAT2P52630 851 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms