RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 ARHGAP23Q9P227 1491 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 H7C1D1 291 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 PCP11498 1178 aaKnown RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 IBSPP21815 317 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 GRAPQ13588 217 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 INTS5Q6P9B9 1019 aaKnown RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 FBXO38Q6PIJ6 1188 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 MST1RQ04912 1400 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 TXNRD3Q86VQ6 643 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 KIFC2Q96AC6 838 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 CLRN2A0PK11 232 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 KRT31Q15323 416 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 IFIH1Q9BYX4 1025 aaKnown RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 FBXO2Q9UK22 296 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 MYO6Q9UM54 1294 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 TMEM110-MUSTN1A8MSY1 372 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 H0YIN7 160 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 CETN3O15182 167 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 IFFO1Q0D2I5 559 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 CETN1Q12798 172 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
COL27A1-204ENST00000477421 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 KIAA1024Q9UPX6 916 aa12.28□□□□□ -0.44
COL27A1-204ENST00000477421 USP17L5A8MUK1 530 aa12.27□□□□□ -0.44
COL27A1-204ENST00000477421 MCM3P25205 808 aa12.27□□□□□ -0.44
COL27A1-204ENST00000477421 TRIM14Q14142 442 aa12.27□□□□□ -0.44
COL27A1-204ENST00000477421 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.44
COL27A1-204ENST00000477421 CEP95Q96GE4 821 aa12.27□□□□□ -0.44
COL27A1-204ENST00000477421 CNOT6LQ96LI5 555 aaKnown RBP12.27□□□□□ -0.44
COL27A1-204ENST00000477421 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.44
COL27A1-204ENST00000477421 MEIS1O00470 390 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 BUB1O43683 1085 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 E4F1Q66K89 784 aaPredicted RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 RSPH14Q9UHP6 348 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 SLIT1O75093 1534 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 POTEMA6NI47 508 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 PPIP5K2O43314 1243 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 GCNT3O95395 438 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 TRAPPC10P48553 1259 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 DNM2P50570 870 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 PABPC4Q13310 644 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 ILDR1Q86SU0 546 aaPredicted RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 DGKHQ86XP1 1220 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 TICAM2Q86XR7 235 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.45
COL27A1-204ENST00000477421 HPS3Q969F9 1004 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 BICD1Q96G01 975 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 TMEM260Q9NX78 707 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 DNM3Q9UQ16 869 aa12.27□□□□□ -0.45
COL27A1-204ENST00000477421 MRPS25P82663 173 aaKnown RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 CCZ1BP86790 482 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 CCZ1P86791 482 aaPredicted RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 ICA1Q05084 483 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 SMCR8Q8TEV9 937 aaPredicted RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 NAA15Q9BXJ9 866 aaKnown RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 PRCPP42785 496 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 PRKG1Q13976 671 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 OSBPL5Q9H0X9 879 aaPredicted RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 MRPL44Q9H9J2 332 aaKnown RBP12.26□□□□□ -0.45
COL27A1-204ENST00000477421 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
COL27A1-204ENST00000477421 KIAA0754O94854 1291 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
COL27A1-204ENST00000477421 ZNF658Q5TYW1 1059 aaPredicted RBP12.25□□□□□ -0.45
COL27A1-204ENST00000477421 STXBP4Q6ZWJ1 553 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 MYOCDQ8IZQ8 938 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 MYCT1Q8N699 235 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
COL27A1-204ENST00000477421 SAR1BQ9Y6B6 198 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
COL27A1-204ENST00000477421 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 FAM26FQ5R3K3 315 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
COL27A1-204ENST00000477421 GJA10Q969M2 543 aa12.25□□□□□ -0.45
COL27A1-204ENST00000477421 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms