RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 KDM5AP29375 1690 aaKnown RBP7.88□□□□□ -1.15
CDKN1B-204ENST00000477087 PREX1Q8TCU6 1659 aa7.88□□□□□ -1.15
CDKN1B-204ENST00000477087 NEXMIFQ5QGS0 1516 aa7.88□□□□□ -1.15
CDKN1B-204ENST00000477087 KIF1BO60333 1816 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 SIGLEC1Q9BZZ2 1709 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 CHURC1-FNTBB4DL54 471 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 FBXL19Q6PCT2 694 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 RNF141Q8WVD5 230 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 ADGRB1O14514 1584 aa7.87□□□□□ -1.15
CDKN1B-204ENST00000477087 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 CENPJQ9HC77 1338 aaPredicted RBP7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 TPP2P29144 1249 aaPredicted RBP7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 GBP1P32455 592 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 CREG2Q8IUH2 290 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 BAHD1Q8TBE0 780 aaPredicted RBP7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 LRRC3Q9BY71 257 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 EID1Q9Y6B2 187 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 ARHGAP23Q9P227 1491 aa7.86□□□□□ -1.15
CDKN1B-204ENST00000477087 LRPPRCP42704 1394 aaKnown RBP7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 NPC1L1Q9UHC9 1359 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 GDNFP39905 211 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 CEBPAP49715 358 aaPredicted RBP7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 RALBP1Q15311 655 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 KRTAP1-3Q8IUG1 177 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 DTWD2Q8NBA8 298 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 ZNF296Q8WUU4 475 aaPredicted RBP7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 KREMEN1Q96MU8 473 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 KIF2CQ99661 725 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 ASPNQ9BXN1 380 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 GPR62Q9BZJ7 368 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 PRKRIP1Q9H875 184 aaPredicted RBP7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 BRMS1Q9HCU9 246 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 KCNQ5Q9NR82 932 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 PCDHB14Q9Y5E9 798 aa7.85□□□□□ -1.15
CDKN1B-204ENST00000477087 PLEKHG1Q9ULL1 1385 aa7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 SLIT1O75093 1534 aa7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 CLTCQ00610 1675 aaKnown RBP7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 FARP2O94887 1054 aaPredicted RBP7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 TTC6Q86TZ1 520 aa7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 DUSP15Q9H1R2 295 aaPredicted RBP7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 DUSP13Q9UII6 198 aa7.84□□□□□ -1.15
CDKN1B-204ENST00000477087 PIK3R4Q99570 1358 aa7.84□□□□□ -1.16
CDKN1B-204ENST00000477087 IFT172Q9UG01 1749 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 MED14O60244 1454 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 RBAK-RBAKDNI3L0D1 243 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 GREM1O60565 184 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 ESR1P03372 595 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 RAC2P15153 192 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 RAG1P15918 1043 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 ZNF16P17020 682 aaPredicted RBP7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 TMEM67Q5HYA8 995 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 TMEM132EQ6IEE7 984 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 TECPR2O15040 1411 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 FAM135BQ49AJ0 1406 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 NINLQ9Y2I6 1382 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 DLC1Q96QB1 1528 aa7.83□□□□□ -1.16
CDKN1B-204ENST00000477087 EVC2Q86UK5 1308 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 PPLO60437 1756 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 WASH4PA8MWX3 477 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 DNAJA2O60884 412 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 LRRN2O75325 713 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 C8AP07357 584 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 GLI1P08151 1106 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 LTKP29376 864 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 MFAP1P55081 439 aaKnown RBP7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 CLEC16AQ2KHT3 1053 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 ARSHQ5FYA8 562 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 ZNF648Q5T619 568 aaPredicted RBP7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 MPZL3Q6UWV2 235 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 TSPYL5Q86VY4 417 aaPredicted RBP7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 YTHDC2Q9H6S0 1430 aaKnown RBP7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 GMIPQ9P107 970 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
CDKN1B-204ENST00000477087 SETD1BQ9UPS6 1966 aaKnown RBP7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 SLC22A31A6NKX4 558 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 SRFP11831 508 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 MCM4P33991 863 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 RNF4P78317 190 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 EGR3Q06889 387 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 APOBRQ0VD83 1088 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 PKN1Q16512 942 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 MLANAQ16655 118 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 SEZ6Q53EL9 994 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 KSR1Q8IVT5 923 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 HOMEZQ8IX15 550 aa7.81□□□□□ -1.16
CDKN1B-204ENST00000477087 SLC38A3Q99624 504 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms