RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 EMILIN3Q9NT22 766 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
COL4A6-206ENST00000477085 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 EDIL3O43854 480 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 GNA11P29992 359 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 STAT2P52630 851 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 CCDC183Q5T5S1 534 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 SHC4Q6S5L8 630 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 KRT26Q7Z3Y9 468 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-206ENST00000477085 FBXO2Q9UK22 296 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-206ENST00000477085 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 SPP2Q13103 211 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-206ENST00000477085 MTMR2Q13614 643 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 FSIP1Q8NA03 581 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 FEZ1Q99689 392 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
COL4A6-206ENST00000477085 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 PLA2G6O60733 806 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 PTPREP23469 700 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
COL4A6-206ENST00000477085 ADCY7P51828 1080 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 NDUFA8P51970 172 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 INF2Q27J81 1249 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 JAKMIP3Q5VZ66 844 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.53■□□□□ 0.24
COL4A6-206ENST00000477085 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
COL4A6-206ENST00000477085 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
COL4A6-206ENST00000477085 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
COL4A6-206ENST00000477085 CCDC194A0A1B0GVG4 234 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 CMA1P23946 247 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 CAMK4Q16566 473 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 UBE2SQ16763 222 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 NOL9Q5SY16 702 aaKnown RBP16.52■□□□□ 0.24
COL4A6-206ENST00000477085 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.24
COL4A6-206ENST00000477085 MRPS27Q92552 414 aaKnown RBP16.52■□□□□ 0.24
COL4A6-206ENST00000477085 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
COL4A6-206ENST00000477085 OPLAHO14841 1288 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 MCM7P33993 719 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 IL17AQ16552 155 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 ZNF280CQ8ND82 737 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 AMNQ9BXJ7 453 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 MORC2Q9Y6X9 1032 aaPredicted RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 SOCS7O14512 581 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 CUTAO60888 179 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 BACE1P56817 501 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 PTGDRQ13258 359 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 USH1GQ495M9 461 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
COL4A6-206ENST00000477085 MOB2Q70IA6 237 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 LPAR1Q92633 364 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 HPSEQ9Y251 543 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
COL4A6-206ENST00000477085 FAM237AA0A1B0GTK4 181 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 MEIS2O14770 477 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
COL4A6-206ENST00000477085 PFKFB1P16118 471 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 VCAM1P19320 739 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 VGLL4Q14135 290 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
COL4A6-206ENST00000477085 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms