RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
CHD6-207ENST00000476641 NAGPAQ9UK23 515 aa9.84□□□□□ -0.83
CHD6-207ENST00000476641 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
CHD6-207ENST00000476641 CTCFP49711 727 aaPredicted RBP9.83□□□□□ -0.84
CHD6-207ENST00000476641 ZNF157P51786 506 aaPredicted RBP9.83□□□□□ -0.84
CHD6-207ENST00000476641 RBM5P52756 815 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD6-207ENST00000476641 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
CHD6-207ENST00000476641 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
CHD6-207ENST00000476641 RASAL3Q86YV0 1011 aa9.83□□□□□ -0.84
CHD6-207ENST00000476641 VEZTQ9HBM0 779 aa9.83□□□□□ -0.84
CHD6-207ENST00000476641 TTF2Q9UNY4 1162 aaKnown RBP9.83□□□□□ -0.84
CHD6-207ENST00000476641 SSC5DA1L4H1 1573 aa9.83□□□□□ -0.84
CHD6-207ENST00000476641 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 PNMA6EA0A0J9YXQ4 647 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 RGS9O75916 674 aaPredicted RBP9.82□□□□□ -0.84
CHD6-207ENST00000476641 PHKA1P46020 1223 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 CACNB3P54284 484 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 FKBP1AP62942 108 aaKnown RBP9.82□□□□□ -0.84
CHD6-207ENST00000476641 MAP2K1Q02750 393 aaPredicted RBP9.82□□□□□ -0.84
CHD6-207ENST00000476641 USP17L2Q6R6M4 530 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 TSEN2Q8NCE0 465 aaKnown RBP9.82□□□□□ -0.84
CHD6-207ENST00000476641 HHIPL1Q96JK4 782 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 DEFB129Q9H1M3 183 aa9.82□□□□□ -0.84
CHD6-207ENST00000476641 TDRD3Q9H7E2 651 aaKnown RBP9.82□□□□□ -0.84
CHD6-207ENST00000476641 M0R2N6 131 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 IPO8O15397 1037 aaKnown RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 SRGAP3O43295 1099 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 CIAO1O76071 339 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 IFIT1P09914 478 aaKnown RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 SLC5A1P13866 664 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 MAP2K2P36507 400 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 CRKP46108 304 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 TFCP2Q12800 502 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 ATP2B3Q16720 1220 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 CAVIN4Q5BKX8 364 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 NBPF12Q5TAG4 269 aaPredicted RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 ZKSCAN2Q63HK3 967 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 APOBEC3FQ8IUX4 373 aaKnown RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 LPIN2Q92539 896 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 COPRSQ9NQ92 184 aa9.81□□□□□ -0.84
CHD6-207ENST00000476641 ZNF70Q9UC06 446 aaPredicted RBP9.81□□□□□ -0.84
CHD6-207ENST00000476641 TCP10L2B9ZVM9 353 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 GNAI3P08754 354 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 TIMM10P62072 90 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 NOGQ13253 232 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 RASA3Q14644 834 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 HIF1AQ16665 826 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 DZIP1LQ8IYY4 767 aaKnown RBP9.8□□□□□ -0.84
CHD6-207ENST00000476641 PANK1Q8TE04 598 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 CLMNQ96JQ2 1002 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 GSX2Q9BZM3 304 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 PRDM10Q9NQV6 1147 aa9.8□□□□□ -0.84
CHD6-207ENST00000476641 ANGEL1Q9UNK9 670 aaKnown RBP9.8□□□□□ -0.84
CHD6-207ENST00000476641 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.8□□□□□ -0.84
CHD6-207ENST00000476641 GNAI2P04899 355 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 NFKB1P19838 968 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 PRDX5P30044 214 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
CHD6-207ENST00000476641 MTX1Q13505 466 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 ITPRIPQ8IWB1 547 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 CSRNP1Q96S65 589 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 TMEM39BQ9GZU3 492 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 SERPINA10Q9UK55 444 aa9.79□□□□□ -0.84
CHD6-207ENST00000476641 PAPPA2Q9BXP8 1791 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 A0A1B0GUL7 405 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
CHD6-207ENST00000476641 FKBP1BP68106 108 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 CCINQ13939 588 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 APOBEC3HQ6NTF7 200 aaKnown RBP9.78□□□□□ -0.84
CHD6-207ENST00000476641 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 FAM35AQ86V20 835 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
CHD6-207ENST00000476641 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 TEPSINQ96N21 525 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 RNF186Q9NXI6 227 aa9.78□□□□□ -0.84
CHD6-207ENST00000476641 MYO1BO43795 1136 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 TRPA1O75762 1119 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 NF2P35240 595 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 IREB2P48200 963 aaKnown RBP9.77□□□□□ -0.85
CHD6-207ENST00000476641 MMP14P50281 582 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 TBC1D22AQ8WUA7 517 aa9.77□□□□□ -0.85
CHD6-207ENST00000476641 C2orf49Q9BVC5 232 aaPredicted RBP9.77□□□□□ -0.85
CHD6-207ENST00000476641 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
CHD6-207ENST00000476641 USP2O75604 605 aaPredicted RBP9.76□□□□□ -0.85
CHD6-207ENST00000476641 CPB1P15086 417 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 NFIAQ12857 509 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 ARMC9Q7Z3E5 817 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 FBXO11Q86XK2 927 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 SIX5Q8N196 739 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 DTWD1Q8N5C7 304 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 ZDHHC15Q96MV8 337 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms