RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SYNGAP1Q96PV0 1343 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 KBTBD13C9JR72 458 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 ZNF792Q3KQV3 632 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
CCM2-208ENST00000476594 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
CCM2-208ENST00000476594 B4E1Z4 1266 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 SGSM2O43147 1006 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 PGK2P07205 417 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 RARBP10826 455 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 PDHBP11177 359 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 ALAS1P13196 640 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 AKR1A1P14550 325 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
CCM2-208ENST00000476594 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
CCM2-208ENST00000476594 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
CCM2-208ENST00000476594 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
CCM2-208ENST00000476594 TNKSO95271 1327 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 ASB14A6NK59 587 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 DNM1LO00429 736 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 ICAM1P05362 532 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 ASPRV1Q53RT3 343 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 BMP2KLQ5H9B9 411 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 LHX8Q68G74 356 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 CHMP4CQ96CF2 233 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 RANBP17Q9H2T7 1088 aaKnown RBP11.96□□□□□ -0.49
CCM2-208ENST00000476594 SPC25Q9HBM1 224 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 RIPK3Q9Y572 518 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 TACC3Q9Y6A5 838 aa11.96□□□□□ -0.49
CCM2-208ENST00000476594 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
CCM2-208ENST00000476594 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 B4DLN1 442 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
CCM2-208ENST00000476594 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 MRPL12P52815 198 aaKnown RBP11.95□□□□□ -0.5
CCM2-208ENST00000476594 TRAF1Q13077 416 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 RNF180Q86T96 592 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 DIS3LQ8TF46 1054 aaKnown RBP11.95□□□□□ -0.5
CCM2-208ENST00000476594 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 ABHD16BQ9H3Z7 469 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 ZSWIM5Q9P217 1185 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
CCM2-208ENST00000476594 FAM184BQ9ULE4 1060 aa11.95□□□□□ -0.5
CCM2-208ENST00000476594 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 PLXNA1Q9UIW2 1896 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 DNAJC25-GNG10A0A024R161 153 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 LOC102724159A0A0B4J2E5 919 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 IGHA2P01877 340 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 SLC16A2P36021 539 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 PWP2Q15269 919 aaKnown RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 RNF20Q5VTR2 975 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 MAF1Q9H063 256 aa11.94□□□□□ -0.5
CCM2-208ENST00000476594 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
CCM2-208ENST00000476594 ZNF536O15090 1300 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 CEP290O15078 2479 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 H0YGN5 161 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
CCM2-208ENST00000476594 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
CCM2-208ENST00000476594 CYP21A2P08686 494 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 TRPV1Q8NER1 839 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 MAP4K1Q92918 833 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
CCM2-208ENST00000476594 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
CCM2-208ENST00000476594 PRKAG2Q9UGJ0 569 aa11.93□□□□□ -0.5
CCM2-208ENST00000476594 PTPDC1A2A3K4 754 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
CCM2-208ENST00000476594 COL6A1P12109 1028 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 PTH1RQ03431 593 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 ACVR2BQ13705 512 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 WTAPQ15007 396 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 TTBK2Q6IQ55 1244 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 ARMCX2Q7L311 632 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 IL25Q9H293 177 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 ANO2Q9NQ90 1003 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
CCM2-208ENST00000476594 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms