RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 NOTOA8MTQ0 251 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 SUSD5O60279 629 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 NAT2P11245 290 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 ITGA4P13612 1032 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 SPPL2CQ8IUH8 684 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 BRF1Q92994 677 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 SRPK1Q96SB4 655 aaKnown RBP7.53□□□□□ -1.2
PTCD3-211ENST00000476215 APBA2Q99767 749 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 RNF32Q9H0A6 362 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
PTCD3-211ENST00000476215 BTBD11A6QL63 1104 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 MEIS1O00470 390 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 PDPK1O15530 556 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 TSPAN15O95858 294 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 KIR2DL1P43626 348 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-211ENST00000476215 KIR2DL2P43627 348 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-211ENST00000476215 ZNF143P52747 638 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-211ENST00000476215 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 IRF2BP1Q8IU81 584 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 KSR1Q8IVT5 923 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 MKL1Q969V6 931 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 PPP1R14AQ96A00 147 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 DEPDC7Q96QD5 511 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 CCDC113Q9H0I3 377 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
PTCD3-211ENST00000476215 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 SNTG2Q9NY99 539 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 WHRNQ9P202 907 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 SUGT1Q9Y2Z0 365 aa7.52□□□□□ -1.21
PTCD3-211ENST00000476215 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 PPM1BO75688 479 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 KRT1P04264 644 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 PCBP3P57721 371 aaKnown RBP7.51□□□□□ -1.21
PTCD3-211ENST00000476215 ZNF445P59923 1031 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 RASA3Q14644 834 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 NFE2L2Q16236 605 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 SV2CQ496J9 727 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 MPZL3Q6UWV2 235 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 FBXO15Q8NCQ5 510 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-211ENST00000476215 MAP6Q96JE9 813 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 PPP1R16BQ96T49 567 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 SLC38A3Q99624 504 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 FOXP3Q9BZS1 431 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 APEX2Q9UBZ4 518 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 TCFL5Q9UL49 500 aa7.51□□□□□ -1.21
PTCD3-211ENST00000476215 CDK11AQ9UQ88 783 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-211ENST00000476215 YBX2Q9Y2T7 364 aaKnown RBP7.51□□□□□ -1.21
PTCD3-211ENST00000476215 FAM221BA6H8Z2 402 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 ZNF205O95201 554 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 ENDOUP21128 410 aaKnown RBP7.5□□□□□ -1.21
PTCD3-211ENST00000476215 BMP8BP34820 402 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-211ENST00000476215 FZD5Q13467 585 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 RASGRF1Q13972 1273 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 FIBCD1Q8N539 461 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 SYTL4Q96C24 671 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-211ENST00000476215 MRFAP1L1Q96HT8 127 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 NOL6Q9H6R4 1146 aaKnown RBP7.5□□□□□ -1.21
PTCD3-211ENST00000476215 FHOD1Q9Y613 1164 aa7.5□□□□□ -1.21
PTCD3-211ENST00000476215 CTSKP43235 329 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 CEBPAP49715 358 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-211ENST00000476215 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-211ENST00000476215 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 MTERF2Q49AM1 385 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 ST13P5Q8NFI4 369 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-211ENST00000476215 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-211ENST00000476215 SLC6A17Q9H1V8 727 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 EPN3Q9H201 632 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 PIF1Q9H611 641 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 LRP2BPQ9P2M1 347 aa7.49□□□□□ -1.21
PTCD3-211ENST00000476215 A0A087WZG4 1122 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 NRDCO43847 1150 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 EFEMP2O95967 443 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 SYPP08247 313 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 ZNF124Q15973 351 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 PKN1Q16512 942 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 INTS4Q96HW7 963 aaKnown RBP7.48□□□□□ -1.21
PTCD3-211ENST00000476215 HHIPL1Q96JK4 782 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 ZDHHC15Q96MV8 337 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 EPB41L4BQ9H329 900 aa7.48□□□□□ -1.21
PTCD3-211ENST00000476215 NSUN3Q9H649 340 aaKnown RBP7.48□□□□□ -1.21
PTCD3-211ENST00000476215 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
PTCD3-211ENST00000476215 AGRPO00253 132 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 NOP56O00567 594 aaKnown RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 CWF19L1Q69YN2 538 aaKnown RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 CRTC3Q6UUV7 619 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 WAPLQ7Z5K2 1190 aa7.47□□□□□ -1.21
PTCD3-211ENST00000476215 ZNF513Q8N8E2 541 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-211ENST00000476215 BVESQ8NE79 360 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms