RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CSADQ9Y600 493 aa14.04□□□□□ -0.16
MRPL55-227ENST00000475832 ELP1O95163 1332 aa14.04□□□□□ -0.16
MRPL55-227ENST00000475832 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 BTBD18B2RXH4 712 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 USP17L10C9JJH3 530 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 DLL1O00548 723 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 CYTH3O43739 400 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 INPP5BP32019 993 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 UBE2HP62256 183 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 STK38Q15208 465 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
MRPL55-227ENST00000475832 WWC2Q6AWC2 1192 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 RASAL3Q86YV0 1011 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 BLIDQ8IZY5 108 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 GPKOWQ92917 476 aaPredicted RBP eCLIP14.03□□□□□ -0.16
MRPL55-227ENST00000475832 SYAP1Q96A49 352 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-227ENST00000475832 WDR18Q9BV38 432 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 JMJD4Q9H9V9 463 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
MRPL55-227ENST00000475832 FEM1BQ9UK73 627 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 PCDHA4Q9UN74 947 aa14.03□□□□□ -0.16
MRPL55-227ENST00000475832 KIF28PB7ZC32 967 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 STXBP3O00186 592 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 PLA2G6O60733 806 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 TRPA1O75762 1119 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 YEATS4O95619 227 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 SLC16A2P36021 539 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 ZYXQ15942 572 aaKnown RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 BTNL9Q6UXG8 535 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 SPICE1Q8N0Z3 855 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 DAGLBQ8NCG7 672 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 ZIC5Q96T25 663 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 CPVLQ9H3G5 476 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 RTEL1Q9NZ71 1219 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
MRPL55-227ENST00000475832 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-227ENST00000475832 CCDC194A0A1B0GVG4 234 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 ESYT2A0FGR8 921 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 SMCO2A6NFE2 343 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 BMP15O95972 392 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 ADCY7P51828 1080 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 MRPL12P52815 198 aaKnown RBP14.01□□□□□ -0.17
MRPL55-227ENST00000475832 CEBPZQ03701 1054 aaKnown RBP14.01□□□□□ -0.17
MRPL55-227ENST00000475832 PRKG1Q13976 671 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 CDC37Q16543 378 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-227ENST00000475832 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 ANO1Q5XXA6 986 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 ZKSCAN4Q969J2 545 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-227ENST00000475832 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-227ENST00000475832 AMNQ9BXJ7 453 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 RCOR1Q9UKL0 485 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 PNMA2Q9UL42 364 aa14.01□□□□□ -0.17
MRPL55-227ENST00000475832 PTPRAP18433 802 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 ME1P48163 572 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
MRPL55-227ENST00000475832 SPP2Q13103 211 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
MRPL55-227ENST00000475832 SLC35G1Q2M3R5 365 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 KRT25Q7Z3Z0 450 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 FBXO11Q86XK2 927 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
MRPL55-227ENST00000475832 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14□□□□□ -0.17
MRPL55-227ENST00000475832 MTMR8Q96EF0 704 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 CHAMP1Q96JM3 812 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 USP28Q96RU2 1077 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 ZMYND12Q9H0C1 365 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 ZHX2Q9Y6X8 837 aa14□□□□□ -0.17
MRPL55-227ENST00000475832 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 FDX1P10109 184 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 NASPP49321 788 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-227ENST00000475832 BACE1P56817 501 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 NR5A1Q13285 461 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 QRICH1Q2TAL8 776 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 CUL5Q93034 780 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 KIFC2Q96AC6 838 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 RNF186Q9NXI6 227 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 PRR12Q9ULL5 1215 aa13.99□□□□□ -0.17
MRPL55-227ENST00000475832 SPTLC2O15270 562 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 MTMR2Q13614 643 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 SPRYD7Q5W111 196 aa13.98□□□□□ -0.17
MRPL55-227ENST00000475832 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms