RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 TDO2P48775 406 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 TLE2Q04725 743 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 SHHQ15465 462 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 C9orf50Q5SZB4 431 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 MAMDC4Q6UXC1 1216 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 ZNF444Q8N0Y2 327 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 PRPF38AQ8NAV1 312 aaKnown RBP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 MKL1Q969V6 931 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 MTMR4Q9NYA4 1195 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 SYNPO2Q9UMS6 1093 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 RIPK3Q9Y572 518 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 LRRC37A2A6NM11 1700 aa8.59□□□□□ -1.03
UBE4B-208ENST00000475795 LAMA2P24043 3122 aaKnown RBP8.59□□□□□ -1.03
UBE4B-208ENST00000475795 LCTP09848 1927 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 SYNRGQ9UMZ2 1314 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
UBE4B-208ENST00000475795 ZBED4O75132 1171 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 PRDM1O75626 825 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 SNAI1O95863 264 aaPredicted RBP8.58□□□□□ -1.04
UBE4B-208ENST00000475795 TTLL1O95922 423 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 APPP05067 770 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 CLTBP09497 229 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
UBE4B-208ENST00000475795 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
UBE4B-208ENST00000475795 ZNF697Q5TEC3 545 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 GMCL1P1Q8NEA9 526 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 CEP95Q96GE4 821 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
UBE4B-208ENST00000475795 SLC38A10Q9HBR0 1119 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 FEM1BQ9UK73 627 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
UBE4B-208ENST00000475795 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 KIAA0355O15063 1070 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 ERC2O15083 957 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 PQBP1O60828 265 aaKnown RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 ITGB8P26012 769 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 CST5P28325 142 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 ACLYP53396 1101 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 OAZ1P54368 228 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 PDE4BQ07343 736 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 SLFN13Q68D06 897 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 ANKRD33Q7Z3H0 272 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 CPXCR1Q8N123 301 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 LRRC47Q8N1G4 583 aaKnown RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 KLHDC9Q8NEP7 349 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 CHST13Q8NET6 341 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 PI4K2BQ8TCG2 481 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 FGD4Q96M96 766 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 FAM161BQ96MY7 647 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 SEC62Q99442 399 aaKnown RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 RAVER2Q9HCJ3 691 aaKnown RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 STARD7Q9NQZ5 370 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 FBXO40Q9UH90 709 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 ZHX1Q9UKY1 873 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
UBE4B-208ENST00000475795 CTDP1Q9Y5B0 961 aaPredicted RBP8.57□□□□□ -1.04
UBE4B-208ENST00000475795 CDH23Q9H251 3354 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 MYADML2A6NDP7 307 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 DUSP11O75319 330 aaKnown RBP8.56□□□□□ -1.04
UBE4B-208ENST00000475795 SLC3A2P08195 630 aaKnown RBP8.56□□□□□ -1.04
UBE4B-208ENST00000475795 TSPY3P0CV98 308 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 TSPY8P0CW00 308 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 FDX1P10109 184 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 BMP3P12645 472 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 RAG1P15918 1043 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 PPARAQ07869 468 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 ACVR2BQ13705 512 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 KCNA10Q16322 511 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-208ENST00000475795 TMEM92Q6UXU6 159 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 ANKRD35Q8N283 1001 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 FSD1Q9BTV5 496 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 NAPBQ9H115 298 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 UPF3AQ9H1J1 476 aaKnown RBP8.56□□□□□ -1.04
UBE4B-208ENST00000475795 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 ABHD16BQ9H3Z7 469 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
UBE4B-208ENST00000475795 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 UNC80Q8N2C7 3258 aa8.56□□□□□ -1.04
UBE4B-208ENST00000475795 DCDC2CA8MYV0 355 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms