RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 STAT2P52630 851 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 INHBEP58166 350 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SNAP25P60880 206 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SSRP1Q08945 709 aaKnown RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 CPLX2Q6PUV4 134 aaKnown RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 PIGSQ96S52 555 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SLC26A6Q9BXS9 759 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 HOXC10Q9NYD6 342 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SLC45A1Q9Y2W3 748 aa11.61□□□□□ -0.55
COL8A1-206ENST00000474648 SPDYE16A6NNV3 312 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 PDHXO00330 501 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 PPP1R11O60927 126 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 CDKL5O76039 1030 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 VEGFBP49765 207 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 REPS2Q8NFH8 660 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 ATG4CQ96DT6 458 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 RNF26Q9BY78 433 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-206ENST00000474648 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
COL8A1-206ENST00000474648 MYH4Q9Y623 1939 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 PNMA6FA0A0J9YX94 578 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 VWA5AO00534 786 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 ZBTB5O15062 677 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 HSPA6P17066 643 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 OSBPP22059 807 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 GJB2P29033 226 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 IKQ13123 557 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 NOGQ13253 232 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 GRM1Q13255 1194 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 PFKFB3Q16875 520 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 LBX2Q6XYB7 198 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 SMC3Q9UQE7 1217 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 ZNF536O15090 1300 aa11.59□□□□□ -0.55
COL8A1-206ENST00000474648 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
COL8A1-206ENST00000474648 CNMDO75829 334 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-206ENST00000474648 DEXIO95424 95 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 FDX1P10109 184 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 CYP2C8P10632 490 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 HERVK_113P62684 666 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 IRX3P78415 501 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-206ENST00000474648 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
COL8A1-206ENST00000474648 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 CDC37Q16543 378 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-206ENST00000474648 QRICH1Q2TAL8 776 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 ZCCHC17Q9NP64 241 aaKnown RBP11.58□□□□□ -0.56
COL8A1-206ENST00000474648 BTBD7Q9P203 1132 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 RBPJLQ9UBG7 517 aa11.58□□□□□ -0.56
COL8A1-206ENST00000474648 ATP2A1O14983 1001 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 PEX10O60683 326 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 ZBED4O75132 1171 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 SCG2P13521 617 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 MAP2K2P36507 400 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 AKAP17AQ02040 695 aaKnown RBP11.57□□□□□ -0.56
COL8A1-206ENST00000474648 SREBF2Q12772 1141 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 Q3C1V9 767 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 TYW1BQ6NUM6 668 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 CCDC174Q6PII3 467 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 AGBL1Q96MI9 1066 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 GJB4Q9NTQ9 266 aa11.57□□□□□ -0.56
COL8A1-206ENST00000474648 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
COL8A1-206ENST00000474648 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-206ENST00000474648 STXBP3O00186 592 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 ICAM1P05362 532 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 TAL1P17542 331 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-206ENST00000474648 DDIT3P35638 169 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 PSEN1P49768 467 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 OAZ1P54368 228 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
COL8A1-206ENST00000474648 COA7Q96BR5 231 aa11.56□□□□□ -0.56
COL8A1-206ENST00000474648 ALG1Q9BT22 464 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms