RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PIM2Q9P1W9 311 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 STAP2Q9UGK3 403 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 CCDC141Q6ZP82 1450 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM64A6NGJ6 449 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM64BA6NI03 449 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 C2orf81A6NN90 581 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 ATP9BO43861 1147 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 SORBS3O60504 671 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 F2P00734 622 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 HTR3AP46098 478 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 PLA2G4AP47712 749 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 GTF2A1P52655 376 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 KRT83P78385 493 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 PFKPQ01813 784 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 PREPLQ4J6C6 727 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 DALRD3Q5D0E6 543 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 KRT26Q7Z3Y9 468 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 MORC1Q86VD1 984 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 ANKRD49Q8WVL7 239 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 RTF1Q92541 710 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 TRIM8Q9BZR9 551 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 MRGBPQ9NV56 204 aa6.94□□□□□ -1.3
SMARCE1-208ENST00000474246 GPRASP1Q5JY77 1395 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 K7ENM7 598 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 TOR1BO14657 336 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 TSPY4P0CV99 314 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 TSPY10P0CW01 314 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 FDX1P10109 184 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 HARSP12081 509 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 MYCLP1P12525 358 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 BCAMP50895 628 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 PPP2R5CQ13362 524 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 SF3B3Q15393 1217 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 RTL10Q7L3V2 364 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 ZNF654Q8IZM8 581 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 ATXN2LQ8WWM7 1075 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 ZNF75CPQ92670 426 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 SLC7A5P2Q9GIP4 190 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 DDX21Q9NR30 783 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 ZIM2Q9NZV7 527 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 BLOC1S6Q9UL45 172 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 ACEP12821 1306 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 CHD8Q9HCK8 2581 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 CASKIN1Q8WXD9 1431 aa6.93□□□□□ -1.3
SMARCE1-208ENST00000474246 A0A0B4J203 849 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 MUSKO15146 869 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ICMTO60725 284 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 GRK2P25098 689 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 RAB27AP51159 221 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 GABREP78334 506 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ZNF211Q13398 564 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 FIP1L1Q6UN15 594 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 HOMER1Q86YM7 354 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 LRRC49Q8IUZ0 686 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 RSRC1Q96IZ7 334 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 NLRP3Q96P20 1036 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 LRFN3Q9BTN0 628 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ATG3Q9NT62 314 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 PIH1D1Q9NWS0 290 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 SIRPGQ9P1W8 387 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 VTI1BQ9UEU0 232 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 FAM184BQ9ULE4 1060 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 SLC30A1Q9Y6M5 507 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 CCNB3Q8WWL7 1395 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ESPNB1AK53 854 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 C9IYK1 514 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ALG1L2C9J202 215 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 TULP2O00295 520 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 KINO60870 393 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 NBNO60934 754 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 CTNNA1P35221 906 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 PAPOLAP51003 745 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 NLRP12P59046 1061 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 USP46P62068 366 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 PLIN5Q00G26 463 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 LMNB2Q03252 620 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ZBTB17Q13105 803 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 CHRNA2Q15822 529 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 RABL6Q3YEC7 729 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 IL31Q6EBC2 164 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ANKK1Q8NFD2 765 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 OR8H1Q8NGG4 311 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 SPATA18Q8TC71 538 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 HDAC7Q8WUI4 952 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 ZNF304Q9HCX3 659 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 SEPT10Q9P0V9 454 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 STIM2Q9P246 746 aa6.92□□□□□ -1.3
SMARCE1-208ENST00000474246 FBXL5Q9UKA1 691 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms