RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 RIPK3Q9Y572 518 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 DNAJC25-GNG10A0A024R161 153 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 POTEB2H3BUK9 544 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 ICAM1P05362 532 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 PDHBP11177 359 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 SYDE2Q5VT97 1194 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 RNF180Q86T96 592 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 TRERF1Q96PN7 1200 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 ZSCAN10Q96SZ4 725 aaPredicted RBP24.02■■□□□ 1.44
SNX13-206ENST00000474067 TACC3Q9Y6A5 838 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 NEDD4P46934 1319 aa24.02■■□□□ 1.44
SNX13-206ENST00000474067 FRMPD3Q5JV73 1810 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 ASB14A6NK59 587 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 COL6A1P12109 1028 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 ALAS1P13196 640 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 MPHOSPH6Q99547 160 aaKnown RBP24.01■■□□□ 1.43
SNX13-206ENST00000474067 RANBP17Q9H2T7 1088 aaKnown RBP24.01■■□□□ 1.43
SNX13-206ENST00000474067 ABHD16BQ9H3Z7 469 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 HOMER2Q9NSB8 354 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 FAM184BQ9ULE4 1060 aa24.01■■□□□ 1.43
SNX13-206ENST00000474067 ERICH2A1L162 156 aa24■■□□□ 1.43
SNX13-206ENST00000474067 SART3Q15020 963 aaKnown RBP24■■□□□ 1.43
SNX13-206ENST00000474067 CCDC174Q6PII3 467 aa24■■□□□ 1.43
SNX13-206ENST00000474067 RALYLQ86SE5 291 aaKnown RBP24■■□□□ 1.43
SNX13-206ENST00000474067 PNMA1Q8ND90 353 aa24■■□□□ 1.43
SNX13-206ENST00000474067 TRPV1Q8NER1 839 aa24■■□□□ 1.43
SNX13-206ENST00000474067 ANKS1AQ92625 1134 aa24■■□□□ 1.43
SNX13-206ENST00000474067 MAF1Q9H063 256 aa24■■□□□ 1.43
SNX13-206ENST00000474067 SPC25Q9HBM1 224 aa24■■□□□ 1.43
SNX13-206ENST00000474067 LOC102724159A0A0B4J2E5 919 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 B4E1Z4 1266 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 SNHG28P0DPA3 235 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 MNX1P50219 401 aaPredicted RBP23.99■■□□□ 1.43
SNX13-206ENST00000474067 ZNF543Q08ER8 600 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 PWP2Q15269 919 aaKnown RBP23.99■■□□□ 1.43
SNX13-206ENST00000474067 ASPRV1Q53RT3 343 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 AGBL1Q96MI9 1066 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 SENP6Q9GZR1 1112 aaPredicted RBP23.99■■□□□ 1.43
SNX13-206ENST00000474067 GPCPD1Q9NPB8 672 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 XPNPEP3Q9NQH7 507 aa23.99■■□□□ 1.43
SNX13-206ENST00000474067 A0A1W2PPC1 479 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 SGSM2O43147 1006 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 HABP4Q5JVS0 413 aaKnown RBP23.98■■□□□ 1.43
SNX13-206ENST00000474067 CASC1Q6TDU7 716 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 C7orf61Q8IZ16 206 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 ZSWIM5Q9P217 1185 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 ADD3Q9UEY8 706 aaKnown RBP23.98■■□□□ 1.43
SNX13-206ENST00000474067 ZNF536O15090 1300 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 TNKSO95271 1327 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 FRMPD2Q68DX3 1309 aaPredicted RBP23.98■■□□□ 1.43
SNX13-206ENST00000474067 WDR19Q8NEZ3 1342 aa23.98■■□□□ 1.43
SNX13-206ENST00000474067 B4DLN1 442 aa23.97■■□□□ 1.43
SNX13-206ENST00000474067 MRPL12P52815 198 aaKnown RBP23.97■■□□□ 1.43
SNX13-206ENST00000474067 IFIT1BQ5T764 474 aaKnown RBP23.97■■□□□ 1.43
SNX13-206ENST00000474067 CHMP4CQ96CF2 233 aa23.97■■□□□ 1.43
SNX13-206ENST00000474067 ZKSCAN3Q9BRR0 538 aa23.97■■□□□ 1.43
SNX13-206ENST00000474067 A1CFQ9NQ94 594 aaKnown RBP23.97■■□□□ 1.43
SNX13-206ENST00000474067 PRKAG2Q9UGJ0 569 aa23.97■■□□□ 1.43
SNX13-206ENST00000474067 ZHX1Q9UKY1 873 aaPredicted RBP23.97■■□□□ 1.43
SNX13-206ENST00000474067 MYCNP04198 464 aaPredicted RBP23.96■■□□□ 1.43
SNX13-206ENST00000474067 TRAF1Q13077 416 aa23.96■■□□□ 1.43
SNX13-206ENST00000474067 PRAMEF19Q5SWL8 479 aa23.96■■□□□ 1.43
SNX13-206ENST00000474067 NCOA7Q8NI08 942 aa23.96■■□□□ 1.43
SNX13-206ENST00000474067 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.96■■□□□ 1.43
SNX13-206ENST00000474067 ZNF865P0CJ78 1059 aaPredicted RBP23.95■■□□□ 1.42
SNX13-206ENST00000474067 SLC16A2P36021 539 aa23.95■■□□□ 1.42
SNX13-206ENST00000474067 ACVR2BQ13705 512 aa23.95■■□□□ 1.42
SNX13-206ENST00000474067 CHRDL2Q6WN34 429 aa23.95■■□□□ 1.42
SNX13-206ENST00000474067 FAM133AQ8N9E0 248 aa23.95■■□□□ 1.42
SNX13-206ENST00000474067 COLQQ9Y215 455 aaPredicted RBP23.95■■□□□ 1.42
SNX13-206ENST00000474067 MKI67P46013 3256 aaKnown RBP23.95■■□□□ 1.42
SNX13-206ENST00000474067 DUSP11O75319 330 aaKnown RBP23.94■■□□□ 1.42
SNX13-206ENST00000474067 NEFLP07196 543 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 PARP1P09874 1014 aaKnown RBP23.94■■□□□ 1.42
SNX13-206ENST00000474067 LRRC41Q15345 812 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 GJC2Q5T442 439 aaPredicted RBP23.94■■□□□ 1.42
SNX13-206ENST00000474067 TTBK2Q6IQ55 1244 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 NSMFQ6X4W1 530 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 ARMCX2Q7L311 632 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 ENAHQ8N8S7 591 aaPredicted RBP23.94■■□□□ 1.42
SNX13-206ENST00000474067 TSEN34Q9BSV6 310 aaKnown RBP23.94■■□□□ 1.42
SNX13-206ENST00000474067 CYP39A1Q9NYL5 469 aa23.94■■□□□ 1.42
SNX13-206ENST00000474067 BMP2KLQ5H9B9 411 aa23.93■■□□□ 1.42
SNX13-206ENST00000474067 NUP133Q8WUM0 1156 aa23.93■■□□□ 1.42
SNX13-206ENST00000474067 MOXD2PA6NHM9 499 aa23.92■■□□□ 1.42
SNX13-206ENST00000474067 DHX16O60231 1041 aaKnown RBP23.92■■□□□ 1.42
SNX13-206ENST00000474067 SNAI1O95863 264 aaPredicted RBP23.92■■□□□ 1.42
SNX13-206ENST00000474067 ANO1Q5XXA6 986 aa23.92■■□□□ 1.42
SNX13-206ENST00000474067 CCDC144CPQ8IYA2 1237 aa23.92■■□□□ 1.42
SNX13-206ENST00000474067 PCSK9Q8NBP7 692 aaKnown RBP23.92■■□□□ 1.42
SNX13-206ENST00000474067 MAP4K1Q92918 833 aa23.92■■□□□ 1.42
SNX13-206ENST00000474067 SLC34A2O95436 690 aa23.91■■□□□ 1.42
SNX13-206ENST00000474067 CYP21A2P08686 494 aa23.91■■□□□ 1.42
SNX13-206ENST00000474067 C1orf53Q5VUE5 145 aa23.91■■□□□ 1.42
SNX13-206ENST00000474067 MTA3Q9BTC8 594 aa23.91■■□□□ 1.42
SNX13-206ENST00000474067 ABCB11O95342 1321 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 PTPDC1A2A3K4 754 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 LRRC26Q2I0M4 334 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 RNF207Q6ZRF8 634 aa23.9■■□□□ 1.42
SNX13-206ENST00000474067 MCF2L2Q86YR7 1114 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms