RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ISM2Q6H9L7 571 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 FAM83AQ86UY5 434 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 GRAMD1CQ8IYS0 662 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
VARS2-206ENST00000473916 MTMR8Q96EF0 704 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 TMEM60Q9H2L4 133 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 SERTAD1Q9UHV2 236 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 DPCR1Q3MIW9 517 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 CCDC84Q86UT8 332 aaPredicted RBP20.53■□□□□ 0.88
VARS2-206ENST00000473916 BMP15O95972 392 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 TAL1P17542 331 aaPredicted RBP20.53■□□□□ 0.88
VARS2-206ENST00000473916 RASA3Q14644 834 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 FERMT2Q96AC1 680 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 ZBTB21Q9ULJ3 1066 aa20.53■□□□□ 0.88
VARS2-206ENST00000473916 ZBTB5O15062 677 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 ADCY5O95622 1261 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 PRR29P0C7W0 189 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 GNA11P29992 359 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 UBE2SQ16763 222 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 QRICH1Q2TAL8 776 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 REXO1Q8N1G1 1221 aaKnown RBP20.52■□□□□ 0.88
VARS2-206ENST00000473916 GMCL1P1Q8NEA9 526 aa20.52■□□□□ 0.88
VARS2-206ENST00000473916 MYH7BA7E2Y1 1941 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 ESYT2A0FGR8 921 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 ACTN4O43707 911 aaKnown RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 ADCY7P51828 1080 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 IQCB1Q15051 598 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 FAM177A1Q8N128 213 aaPredicted RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 MDM2Q00987 491 aaPredicted RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 NONOQ15233 471 aaKnown RBP eCLIP20.51■□□□□ 0.87
VARS2-206ENST00000473916 LETM2Q2VYF4 491 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 TEPSINQ96N21 525 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
VARS2-206ENST00000473916 ANO10Q9NW15 660 aa20.51■□□□□ 0.87
VARS2-206ENST00000473916 hCG_1984214I3L0E3 225 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 CDC25AP30304 524 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 CDC37Q16543 378 aaPredicted RBP20.5■□□□□ 0.87
VARS2-206ENST00000473916 KRT25Q7Z3Z0 450 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 ZNF713Q8N859 430 aaPredicted RBP20.5■□□□□ 0.87
VARS2-206ENST00000473916 TBCKQ8TEA7 893 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 DHX58Q96C10 678 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 SBF1O95248 1867 aa20.5■□□□□ 0.87
VARS2-206ENST00000473916 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
VARS2-206ENST00000473916 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
VARS2-206ENST00000473916 DHX40Q8IX18 779 aaKnown RBP20.49■□□□□ 0.87
VARS2-206ENST00000473916 TRIM44Q96DX7 344 aaPredicted RBP20.49■□□□□ 0.87
VARS2-206ENST00000473916 GMCL1Q96IK5 515 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 TUBE1Q9UJT0 475 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 EDIL3O43854 480 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 TBC1D12O60347 775 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
VARS2-206ENST00000473916 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
VARS2-206ENST00000473916 BMP3P12645 472 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
VARS2-206ENST00000473916 FHDC1Q9C0D6 1143 aaPredicted RBP20.48■□□□□ 0.87
VARS2-206ENST00000473916 HACL1Q9UJ83 578 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 PP2D1A8MPX8 630 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 CAP2P40123 477 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 ARHGAP27Q6ZUM4 889 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 NEK8Q86SG6 692 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 DPF2Q92785 391 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 SPON1Q9HCB6 807 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 RIC8AQ9NPQ8 531 aa20.48■□□□□ 0.87
VARS2-206ENST00000473916 CASP1P29466 404 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 NLRP12P59046 1061 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 POSTNQ15063 836 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 CEP57L1Q8IYX8 460 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 AOPEPQ8N6M6 819 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
VARS2-206ENST00000473916 RTN4Q9NQC3 1192 aaKnown RBP20.47■□□□□ 0.87
VARS2-206ENST00000473916 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 FAM83BQ5T0W9 1011 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 ARL6IP4Q66PJ3 421 aaKnown RBP20.46■□□□□ 0.87
VARS2-206ENST00000473916 PPP1R18Q6NYC8 613 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 TMX2Q9Y320 296 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 PCDHA1Q9Y5I3 950 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 BMP6P22004 513 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 TNNI2P48788 182 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 CLK2P49760 499 aaKnown RBP20.46■□□□□ 0.87
VARS2-206ENST00000473916 MAP3K10Q02779 954 aa20.46■□□□□ 0.87
VARS2-206ENST00000473916 USP17L15C9J2P7 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L13C9JLJ4 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L11C9JVI0 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L18D6R9N7 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L22D6RA61 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L17D6RBQ6 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L19D6RCP7 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L20D6RJB6 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L24Q0WX57 530 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 ZRSR1Q15695 479 aaKnown RBP20.45■□□□□ 0.86
VARS2-206ENST00000473916 USH1GQ495M9 461 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 USP17L6PQ6QN14 398 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms