RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 PHOSPHO2Q8TCD6 241 aa13.59□□□□□ -0.23
MACF1-215ENST00000473843 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
MACF1-215ENST00000473843 SCLYQ96I15 445 aa13.59□□□□□ -0.23
MACF1-215ENST00000473843 KIF28PB7ZC32 967 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
MACF1-215ENST00000473843 CABYRO75952 493 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 ACTN1P12814 892 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 KCNA5P22460 613 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 NKX3-2P78367 333 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
MACF1-215ENST00000473843 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 AGBL1Q96MI9 1066 aa13.58□□□□□ -0.24
MACF1-215ENST00000473843 GRXCR2A6NFK2 248 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 CTAGE5O15320 804 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 B4GALT4O60513 344 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 IGSF3O75054 1194 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 USP5P45974 858 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
MACF1-215ENST00000473843 ITGA7Q13683 1181 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 ACVR2BQ13705 512 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 GSE1Q14687 1217 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
MACF1-215ENST00000473843 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 HERC6Q8IVU3 1022 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 PRSS33Q8NF86 280 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 ADAMTS5Q9UNA0 930 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 EPG5Q9HCE0 2579 aa13.57□□□□□ -0.24
MACF1-215ENST00000473843 TPRP12270 2363 aaKnown RBP13.57□□□□□ -0.24
MACF1-215ENST00000473843 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 GFRA3O60609 400 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 STAT3P40763 770 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 SPRED2Q7Z698 418 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 ZNF467Q7Z7K2 595 aaPredicted RBP13.56□□□□□ -0.24
MACF1-215ENST00000473843 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 PRRX2Q99811 253 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
MACF1-215ENST00000473843 GVINP1Q7Z2Y8 2422 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 KMT2EQ8IZD2 1858 aa13.56□□□□□ -0.24
MACF1-215ENST00000473843 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
MACF1-215ENST00000473843 MPHOSPH10O00566 681 aaKnown RBP13.55□□□□□ -0.24
MACF1-215ENST00000473843 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
MACF1-215ENST00000473843 BEX3Q00994 111 aa13.55□□□□□ -0.24
MACF1-215ENST00000473843 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
MACF1-215ENST00000473843 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
MACF1-215ENST00000473843 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
MACF1-215ENST00000473843 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
MACF1-215ENST00000473843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.55□□□□□ -0.24
MACF1-215ENST00000473843 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
MACF1-215ENST00000473843 VWA5AO00534 786 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 ZP2Q05996 745 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 SNRKQ9NRH2 765 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 PRKAG3Q9UGI9 489 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
MACF1-215ENST00000473843 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 TRIOO75962 3097 aa13.54□□□□□ -0.24
MACF1-215ENST00000473843 MAP3K13O43283 966 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 CYP7A1P22680 504 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 RFC2P35250 354 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 PLCD1P51178 756 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 GABPAQ06546 454 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 MS4A3Q96HJ5 214 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
MACF1-215ENST00000473843 FAM50BQ9Y247 325 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
MACF1-215ENST00000473843 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
MACF1-215ENST00000473843 SUPT20HL2P0C7V6 817 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 ERMP1Q7Z2K6 904 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 REPS2Q8NFH8 660 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 ALDH8A1Q9H2A2 487 aaPredicted RBP13.52□□□□□ -0.25
MACF1-215ENST00000473843 FBXO28Q9NVF7 368 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
MACF1-215ENST00000473843 ASTN1O14525 1302 aa13.52□□□□□ -0.25
MACF1-215ENST00000473843 SCN10AQ9Y5Y9 1956 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 ZEB2O60315 1214 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 ICA1Q05084 483 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 TCF15Q12870 199 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
MACF1-215ENST00000473843 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 TEX13BQ9BXU2 312 aa13.51□□□□□ -0.25
MACF1-215ENST00000473843 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms