RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RASA3Q14644 834 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 IQCB1Q15051 598 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 ZRSR1Q15695 479 aaKnown RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 QRICH1Q2TAL8 776 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 AOPEPQ8N6M6 819 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 ZBED3Q96IU2 234 aaPredicted RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 ZNF830Q96NB3 372 aaPredicted RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 PLIN2Q99541 437 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 C6orf50Q9HD87 102 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 FAM13BQ9NYF5 915 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 TMEM232C9JQI7 657 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 TNNI2P48788 182 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 USH1GQ495M9 461 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 REXO1Q8N1G1 1221 aaKnown RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 C4orf32Q8N8J7 132 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 SPC24Q8NBT2 197 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 DAGLBQ8NCG7 672 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 TBCKQ8TEA7 893 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 GJA10Q969M2 543 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 MKL1Q969V6 931 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 PCDHA5Q9Y5H7 936 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 ARFGEF1Q9Y6D6 1849 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L15C9J2P7 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L13C9JLJ4 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L11C9JVI0 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L18D6R9N7 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L22D6RA61 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L17D6RBQ6 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 MYO1BO43795 1136 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 CCNT1O60563 726 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L24Q0WX57 530 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 GPATCH4Q5T3I0 446 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 USP17L6PQ6QN14 398 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 ARHGAP27Q6ZUM4 889 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 DHX40Q8IX18 779 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 ANO10Q9NW15 660 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 CNOT7Q9UIV1 285 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 PNMA6FA0A0J9YX94 578 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 ZBTB5O15062 677 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 PTMAP06454 111 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 BMP6P22004 513 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 ADCY7P51828 1080 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 TNIP1Q15025 636 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 CDC37Q16543 378 aaPredicted RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 DLK2Q6UY11 383 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 VPS33BQ9H267 617 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 PGAP2Q9UHJ9 254 aa7.09□□□□□ -1.27
CLK1-210ENST00000473565 HERC5Q9UII4 1024 aaKnown RBP7.09□□□□□ -1.27
CLK1-210ENST00000473565 EDIL3O43854 480 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TDP2O95551 362 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 SMARCA1P28370 1054 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 GNA11P29992 359 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TRAPPC10P48553 1259 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 MDM2Q00987 491 aaPredicted RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 KARSQ15046 597 aaKnown RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 NONOQ15233 471 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLK1-210ENST00000473565 POTEDQ86YR6 584 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 ZNF579Q8NAF0 562 aaKnown RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 MTMR14Q8NCE2 650 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 CCDC12Q8WUD4 166 aaPredicted RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 FERMT2Q96AC1 680 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TIGD1Q96MW7 591 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 FHDC1Q9C0D6 1143 aaPredicted RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 FZD9O00144 591 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 POSTNQ15063 836 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 HSP90AA4PQ58FG1 418 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 FAM83BQ5T0W9 1011 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TRPM4Q8TD43 1214 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 DCAF4Q8WV16 495 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 P2RX7Q99572 595 aaKnown RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 BLZF1Q9H2G9 400 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 FBXO28Q9NVF7 368 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 HACL1Q9UJ83 578 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 MYH7BA7E2Y1 1941 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 BECN2A8MW95 431 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 SLC37A4O43826 429 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 BMP3P12645 472 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 NLRP12P59046 1061 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 ZNF280AP59817 542 aaPredicted RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 NBPF12Q5TAG4 269 aaPredicted RBP7.08□□□□□ -1.28
CLK1-210ENST00000473565 GALNT17Q6IS24 598 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 NEK8Q86SG6 692 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 LRRC15Q8TF66 581 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 MTMR8Q96EF0 704 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TEPSINQ96N21 525 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 TUBE1Q9UJT0 475 aa7.08□□□□□ -1.28
CLK1-210ENST00000473565 COL2A1P02458 1487 aaPredicted RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 GOLGA6L19H0YKK7 550 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 BMP15O95972 392 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 CAP2P40123 477 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 KIF4BQ2VIQ3 1234 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms