RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 SOX5P35711 763 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 PRKCQQ04759 706 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 CBX2Q14781 532 aaPredicted RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 FNDC3BQ53EP0 1204 aaKnown RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 ANKRD39Q53RE8 183 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 FAM209AQ5JX71 171 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 THNSL2Q86YJ6 484 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 POU5F2Q8N7G0 328 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 MFSD2AQ8NA29 543 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 PI4K2BQ8TCG2 481 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 STAG1Q8WVM7 1258 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 FGD4Q96M96 766 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 CEP89Q96ST8 783 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 MKRN2Q9H000 416 aaKnown RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 KLHL25Q9H0H3 589 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 CAAP1Q9H8G2 361 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 MBNL3Q9NUK0 354 aaKnown RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 VAV3Q9UKW4 847 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 PLAGL2Q9UPG8 496 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 SUGT1Q9Y2Z0 365 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 DNAJC25-GNG10A0A024R161 153 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 A0A087X0B3 334 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 CBFA2T2O43439 604 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 PDE8AO60658 829 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 LRIG2O94898 1065 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 PDGFRBP09619 1106 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 FGFR1P11362 822 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 PABPC1P11940 636 aaKnown RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 STAT3P40763 770 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 SUMO1P63165 101 aaKnown RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 RNF4P78317 190 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 ZNF648Q5T619 568 aaPredicted RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 YOD1Q5VVQ6 348 aaPredicted RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 DCAF15Q66K64 600 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 POMZP3Q6PJE2 187 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 NSMFQ6X4W1 530 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 ARMCX6Q7L4S7 300 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 UBE3DQ7Z6J8 389 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 FERMT3Q86UX7 667 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 C7orf61Q8IZ16 206 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 BVESQ8NE79 360 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 XAGE3Q8WTP9 111 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 ZNF512BQ96KM6 892 aaPredicted RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 MRPL4Q9BYD3 311 aaKnown RBP4.93□□□□□ -1.62
RGPD6-208ENST00000473101 WHRNQ9P202 907 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 APEX2Q9UBZ4 518 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 CEP131Q9UPN4 1083 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 ATP8A1Q9Y2Q0 1164 aa4.93□□□□□ -1.62
RGPD6-208ENST00000473101 CARMIL2Q6F5E8 1435 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 PRODHO43272 600 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 CD247P20963 164 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 NFKB2Q00653 900 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 AUHQ13825 339 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 NBPF12Q5TAG4 269 aaPredicted RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 CCDC181Q5TID7 509 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 ANGEL2Q5VTE6 544 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 ZNF227Q86WZ6 799 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 CRACR2BQ8N4Y2 399 aaPredicted RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 PRPF38AQ8NAV1 312 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 FAM168AQ92567 244 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 RCC1LQ96I51 464 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 HEXIM2Q96MH2 286 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 CLUHP3Q96NS8 147 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 MKNK2Q9HBH9 465 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 PRDM10Q9NQV6 1147 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 PRDM7Q9NQW5 492 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 HOMER2Q9NSB8 354 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 INTS7Q9NVH2 962 aaKnown RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 MAGEC2Q9UBF1 373 aaPredicted RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 MCM8Q9UJA3 840 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 MAPRE3Q9UPY8 281 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 ZNF451Q9Y4E5 1061 aa4.92□□□□□ -1.62
RGPD6-208ENST00000473101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.92□□□□□ -1.62
RGPD6-208ENST00000473101 A0A087WZG4 1122 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 PARNO95453 639 aaKnown RBP4.91□□□□□ -1.62
RGPD6-208ENST00000473101 ITGA4P13612 1032 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 JAG1P78504 1218 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 IKZF1Q13422 519 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 NOL9Q5SY16 702 aaKnown RBP4.91□□□□□ -1.62
RGPD6-208ENST00000473101 LETMD1Q6P1Q0 360 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
RGPD6-208ENST00000473101 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 JAMLQ86YT9 394 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 ZNF513Q8N8E2 541 aaPredicted RBP4.91□□□□□ -1.62
RGPD6-208ENST00000473101 PPP1R13LQ8WUF5 828 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 KREMEN1Q96MU8 473 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 GP6Q9HCN6 339 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 GTF2IRD1Q9UHL9 959 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 G3BP2Q9UN86 482 aaKnown RBP4.91□□□□□ -1.62
RGPD6-208ENST00000473101 AKT3Q9Y243 479 aa4.91□□□□□ -1.62
RGPD6-208ENST00000473101 KCNQ2O43526 872 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 CPEP16870 476 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 ETV3P41162 512 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 GRIA2P42262 883 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 ZNF124Q15973 351 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 WWC2Q6AWC2 1192 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 CNNM4Q6P4Q7 775 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms