RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
CHEK2-223ENST00000472807 ZNF467Q7Z7K2 595 aaPredicted RBP10.54□□□□□ -0.72
CHEK2-223ENST00000472807 ZNF589Q86UQ0 364 aaPredicted RBP10.54□□□□□ -0.72
CHEK2-223ENST00000472807 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 CHMP4CQ96CF2 233 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 LBHD1Q9BQE6 289 aaPredicted RBP10.54□□□□□ -0.72
CHEK2-223ENST00000472807 ACAD9Q9H845 621 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 INCENPQ9NQS7 918 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 IL17RBQ9NRM6 502 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 ZHX1Q9UKY1 873 aaPredicted RBP10.54□□□□□ -0.72
CHEK2-223ENST00000472807 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
CHEK2-223ENST00000472807 DNAJC25-GNG10A0A024R161 153 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 SOX1O00570 391 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 PLA2G6O60733 806 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 IGHDP01880 384 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 FGRP09769 529 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 ZNF865P0CJ78 1059 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 PCP11498 1178 aaKnown RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 ADCYAP1R1P41586 468 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 TKFCQ3LXA3 575 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 MAMDC4Q6UXC1 1216 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 SLC39A5Q6ZMH5 540 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 KCTD1Q719H9 257 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 LENG1Q96BZ8 264 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-223ENST00000472807 DIAPH3Q9NSV4 1193 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 FAM184BQ9ULE4 1060 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 MCM3APO60318 1980 aa10.53□□□□□ -0.72
CHEK2-223ENST00000472807 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 HIP1O00291 1037 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 PGK1P00558 417 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 TOP1P11387 765 aaKnown RBP10.52□□□□□ -0.73
CHEK2-223ENST00000472807 SDSP20132 328 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 NOVP48745 357 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 HAND2P61296 217 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 SNX17Q15036 470 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 LRIT3Q3SXY7 679 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 C1orf53Q5VUE5 145 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 PRDM5Q9NQX1 630 aaPredicted RBP10.52□□□□□ -0.73
CHEK2-223ENST00000472807 TCP11L1Q9NUJ3 509 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.52□□□□□ -0.73
CHEK2-223ENST00000472807 PRR12Q9ULL5 1215 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 TACC3Q9Y6A5 838 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 SYNRGQ9UMZ2 1314 aa10.52□□□□□ -0.73
CHEK2-223ENST00000472807 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 A0A1W2PQ45 241 aaPredicted RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 A0A1W2PQY0 241 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 DUSP11O75319 330 aaKnown RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 ALAS1P13196 640 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 ACVR2BQ13705 512 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 CWC27Q6UX04 472 aaKnown RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 RASGRP2Q7LDG7 609 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 ESR2Q92731 530 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 TRERF1Q96PN7 1200 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 TMEM47Q9BQJ4 181 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 SPC25Q9HBM1 224 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
CHEK2-223ENST00000472807 CCPG1Q9ULG6 757 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 ZNF536O15090 1300 aa10.51□□□□□ -0.73
CHEK2-223ENST00000472807 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 MOXD2PA6NHM9 499 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 ASB14A6NK59 587 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 ZNF213O14771 459 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 ADAMTS4O75173 837 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 ICAM1P05362 532 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 NT5C2P49902 561 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 SNAP25P60880 206 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 CNTN2Q02246 1040 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 CCDC144BQ3MJ40 725 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 SYDE2Q5VT97 1194 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 TBC1D10CQ8IV04 446 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 FAM133AQ8N9E0 248 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 NUP133Q8WUM0 1156 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 FGD4Q96M96 766 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 NEDD4P46934 1319 aa10.5□□□□□ -0.73
CHEK2-223ENST00000472807 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms