RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
CLK1-209ENST00000472679 LRP10Q7Z4F1 713 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 WAPLQ7Z5K2 1190 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 ZMYM5Q9UJ78 669 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 GSTM1P09488 218 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 POU4F1Q01851 419 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 GRB10Q13322 594 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 MTERF2Q49AM1 385 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 BTN2A2Q8WVV5 523 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 DNAJC7Q99615 494 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 G6PC3Q9BUM1 346 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 CDADC1Q9BWV3 514 aa8.65□□□□□ -1.02
CLK1-209ENST00000472679 STXBP3O00186 592 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 AURKAO14965 403 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 CAPNS1P04632 268 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 ZGLP1P0C6A0 271 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 GRIA2P42262 883 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 AMPD2Q01433 879 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 CYP4F3Q08477 520 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 SF1Q15637 639 aaKnown RBP8.64□□□□□ -1.03
CLK1-209ENST00000472679 POMZP3Q6PJE2 187 aa8.64□□□□□ -1.03
CLK1-209ENST00000472679 NOP2P46087 812 aaKnown RBP8.63□□□□□ -1.03
CLK1-209ENST00000472679 CEBPAP49715 358 aaPredicted RBP8.63□□□□□ -1.03
CLK1-209ENST00000472679 HK2P52789 917 aa8.63□□□□□ -1.03
CLK1-209ENST00000472679 PPP2R2AP63151 447 aa8.63□□□□□ -1.03
CLK1-209ENST00000472679 NBPF11Q86T75 865 aa8.63□□□□□ -1.03
CLK1-209ENST00000472679 RC3H2Q9HBD1 1191 aaKnown RBP8.63□□□□□ -1.03
CLK1-209ENST00000472679 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
CLK1-209ENST00000472679 AGRPO00253 132 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 ERVFC1P60507 584 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 SSRP1Q08945 709 aaKnown RBP8.62□□□□□ -1.03
CLK1-209ENST00000472679 IFRD2Q12894 506 aaPredicted RBP8.62□□□□□ -1.03
CLK1-209ENST00000472679 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 CRACR2BQ8N4Y2 399 aaPredicted RBP8.62□□□□□ -1.03
CLK1-209ENST00000472679 TMEM52Q8NDY8 209 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 ZNF669Q96BR6 464 aaPredicted RBP8.62□□□□□ -1.03
CLK1-209ENST00000472679 SGSM3Q96HU1 749 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 SPATA9Q9BWV2 254 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 NKX2-4Q9H2Z4 354 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 ARHGEF4Q9NR80 690 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 ERVK13-1Q9NX77 482 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
CLK1-209ENST00000472679 C2orf71A6NGG8 1288 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 ADCY3O60266 1144 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 CBLL1Q75N03 491 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 LILRB2Q8N423 598 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 HHIPL1Q96JK4 782 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 CTNND2Q9UQB3 1225 aa8.61□□□□□ -1.03
CLK1-209ENST00000472679 KDM2BQ8NHM5 1336 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 FGF10O15520 208 aaPredicted RBP8.6□□□□□ -1.03
CLK1-209ENST00000472679 SCRN1Q12765 414 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 YOD1Q5VVQ6 348 aaPredicted RBP8.6□□□□□ -1.03
CLK1-209ENST00000472679 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 MAP6Q96JE9 813 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 FCRL2Q96LA5 508 aaPredicted RBP8.6□□□□□ -1.03
CLK1-209ENST00000472679 SP110Q9HB58 689 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 GPRC5CQ9NQ84 441 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 BACE2Q9Y5Z0 518 aa8.6□□□□□ -1.03
CLK1-209ENST00000472679 USP2O75604 605 aaPredicted RBP8.59□□□□□ -1.03
CLK1-209ENST00000472679 FAM153BP0C7A2 387 aa8.59□□□□□ -1.03
CLK1-209ENST00000472679 GDNFP39905 211 aa8.59□□□□□ -1.03
CLK1-209ENST00000472679 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
CLK1-209ENST00000472679 LRRC47Q8N1G4 583 aaKnown RBP8.59□□□□□ -1.03
CLK1-209ENST00000472679 COPS5Q92905 334 aa8.59□□□□□ -1.03
CLK1-209ENST00000472679 NOTOA8MTQ0 251 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 THBDP07204 575 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
CLK1-209ENST00000472679 ECI1P42126 302 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
CLK1-209ENST00000472679 PRSS53Q2L4Q9 553 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 FOXB2Q5VYV0 432 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
CLK1-209ENST00000472679 PTCHD1Q96NR3 888 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 KANSL2Q9H9L4 492 aa8.58□□□□□ -1.04
CLK1-209ENST00000472679 FADS2P1A8MWK0 482 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 EFEMP2O95967 443 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 SNRPB2P08579 225 aaKnown RBP8.57□□□□□ -1.04
CLK1-209ENST00000472679 ENDOUP21128 410 aaKnown RBP8.57□□□□□ -1.04
CLK1-209ENST00000472679 HOXC12P31275 282 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 SEPHS1P49903 392 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 GFRA1P56159 465 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 DUSP4Q13115 394 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 EEF1DP3Q658K8 133 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 DENND5AQ6IQ26 1287 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 NAT16Q8N8M0 369 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 TMEM145Q8NBT3 493 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 PDZD8Q8NEN9 1154 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 AARSD1Q9BTE6 412 aaKnown RBP8.57□□□□□ -1.04
CLK1-209ENST00000472679 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
CLK1-209ENST00000472679 CLEC1BQ9P126 229 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms