RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 IKQ13123 557 aaPredicted RBP18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 TKFCQ3LXA3 575 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 RASGRP2Q7LDG7 609 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 REPS2Q8NFH8 660 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 P2RX7Q99572 595 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 LARP6Q9BRS8 491 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 ZFYVE28Q9HCC9 887 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 TLR2O60603 784 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 CTDNEP1O95476 244 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 ICAM1P05362 532 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 AKAP17AQ02040 695 aaKnown RBP18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 SSRP1Q08945 709 aaKnown RBP18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 STK3Q13188 491 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 FAM110CQ1W6H9 321 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 SLC35G1Q2M3R5 365 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 KIFC2Q96AC6 838 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 UBA5Q9GZZ9 404 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 SH3GLB2Q9NR46 395 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 FBXO28Q9NVF7 368 aa18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 SEC63Q9UGP8 760 aaKnown RBP18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.56
PCOLCE-205ENST00000472348 SLC16A2P36021 539 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 TAF1CQ15572 869 aaPredicted RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 PFKFB3Q16875 520 aaPredicted RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 NOL8Q76FK4 1167 aaKnown RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 CCDC83Q8IWF9 413 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 SHCBP1Q8NEM2 672 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 SMCR8Q8TEV9 937 aaPredicted RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 ATG4CQ96DT6 458 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 MAP3K20Q9NYL2 800 aaKnown RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 TSKSQ9UJT2 592 aa18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
PCOLCE-205ENST00000472348 RBBP6Q7Z6E9 1792 aaKnown RBP18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 SLC25A27O95847 323 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 GHRHRQ02643 423 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 RIOX2Q8IUF8 465 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 CCDC12Q8WUD4 166 aaPredicted RBP18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 BEGAINQ9BUH8 593 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 GLT8D2Q9H1C3 349 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 RBPJLQ9UBG7 517 aa18.56■□□□□ 0.56
PCOLCE-205ENST00000472348 ZNF536O15090 1300 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 ESYT2A0FGR8 921 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 BCRP11274 1271 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 SCG2P13521 617 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 XBP1P17861 261 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 CTCFP49711 727 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 CCNA1P78396 465 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 PKN1Q16512 942 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 C17orf99Q6UX52 265 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 FBXO11Q86XK2 927 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 PIGSQ96S52 555 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 FBXO40Q9UH90 709 aa18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 ISY1Q9ULR0 285 aaKnown RBP18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 CTDP1Q9Y5B0 961 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 V9GY48 417 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-205ENST00000472348 ABCB11O95342 1321 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 LBX1P52954 281 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 GALNT17Q6IS24 598 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 CHST13Q8NET6 341 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 GPRC5AQ8NFJ5 357 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 BARHL2Q9NY43 387 aa18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 ORC3Q9UBD5 711 aaPredicted RBP18.54■□□□□ 0.56
PCOLCE-205ENST00000472348 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 CYP2C8P10632 490 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 FDPSP14324 419 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 PDCP20941 246 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 STAT3P40763 770 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 ERVK-9P63128 1117 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 ERVK-24P63145 666 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 TMEM132BQ14DG7 1078 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 MCTP2Q6DN12 878 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 PHKBQ93100 1093 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 SPATC1LQ9H0A9 340 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 MROH8Q9H579 483 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 MRPL11Q9Y3B7 192 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-205ENST00000472348 MGAMO43451 1857 aa18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 CNMDO75829 334 aa18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.56
PCOLCE-205ENST00000472348 RNF186Q9NXI6 227 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms