RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 STRBPQ96SI9 672 aaKnown RBP13.62□□□□□ -0.23
IRF1-208ENST00000472045 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 PREX1Q8TCU6 1659 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 HOXD10P28358 340 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 FAM178BQ8IXR5 827 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
IRF1-208ENST00000472045 CWC15Q9P013 229 aaKnown RBP13.62□□□□□ -0.23
IRF1-208ENST00000472045 USP17L10C9JJH3 530 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
IRF1-208ENST00000472045 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 RPS6KC1Q96S38 1066 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 SLF1Q9BQI6 1058 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 WDR11Q9BZH6 1224 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
IRF1-208ENST00000472045 TNNC2P02585 160 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
IRF1-208ENST00000472045 CYP2J2P51589 502 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 MTX1Q13505 466 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 STYK1Q6J9G0 422 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 DCAF4Q8WV16 495 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 CLSTN2Q9H4D0 955 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 UQCRHP07919 91 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 PPP2R5AQ15172 486 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 TTC14Q96N46 770 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 COL4A3BPQ9Y5P4 624 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 SERTAD1Q9UHV2 236 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 GCFC2P16383 781 aaKnown RBP13.61□□□□□ -0.23
IRF1-208ENST00000472045 SF3B3Q15393 1217 aaKnown RBP13.61□□□□□ -0.23
IRF1-208ENST00000472045 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 FAM84BQ96KN1 310 aaPredicted RBP13.61□□□□□ -0.23
IRF1-208ENST00000472045 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 BCCIPQ9P287 314 aaKnown RBP eCLIP13.61□□□□□ -0.23
IRF1-208ENST00000472045 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
IRF1-208ENST00000472045 CYP2D6P10635 497 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SPP2Q13103 211 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 ASIC2Q16515 512 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 FAM83BQ5T0W9 1011 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SUGT1Q9Y2Z0 365 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
IRF1-208ENST00000472045 BCRP11274 1271 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 EIF2AK2P19525 551 aaKnown RBP13.6□□□□□ -0.23
IRF1-208ENST00000472045 SCRN1Q12765 414 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 DGKHQ86XP1 1220 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
IRF1-208ENST00000472045 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
IRF1-208ENST00000472045 ERCC3P19447 782 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 DAPK3O43293 454 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 FOXO4P98177 505 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 SEPT2Q15019 361 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 PANK4Q9NVE7 773 aa13.6□□□□□ -0.23
IRF1-208ENST00000472045 UTYO14607 1347 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 PTGDRQ13258 359 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 TRIM14Q14142 442 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 MST1RQ04912 1400 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 ATP2A1O14983 1001 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 KIAA0754O94854 1291 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 CPS1P31327 1500 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 LONP1P36776 959 aaKnown RBP13.59□□□□□ -0.23
IRF1-208ENST00000472045 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
IRF1-208ENST00000472045 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 GUCA1BQ9UMX6 200 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
IRF1-208ENST00000472045 LAD1O00515 517 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 ZBTB24O43167 697 aaPredicted RBP13.59□□□□□ -0.23
IRF1-208ENST00000472045 SPOPO43791 374 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 GNA14O95837 355 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 TRAPPC10P48553 1259 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 SNAP25P60880 206 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 IGSF22Q8N9C0 903 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
IRF1-208ENST00000472045 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms