RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SLC4A7Q9Y6M7 1214 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 CCL23P55773 120 aa22.87■■□□□ 1.25
SORT1-203ENST00000471996 BEX3Q00994 111 aa22.87■■□□□ 1.25
SORT1-203ENST00000471996 SKIV2LQ15477 1246 aaKnown RBP22.87■■□□□ 1.25
SORT1-203ENST00000471996 PRPF38AQ8NAV1 312 aaKnown RBP22.87■■□□□ 1.25
SORT1-203ENST00000471996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.87■■□□□ 1.25
SORT1-203ENST00000471996 NUP88Q99567 741 aaPredicted RBP22.87■■□□□ 1.25
SORT1-203ENST00000471996 KATNBL1Q9H079 304 aa22.87■■□□□ 1.25
SORT1-203ENST00000471996 EXOC6BQ9Y2D4 811 aa22.87■■□□□ 1.25
SORT1-203ENST00000471996 CABYRO75952 493 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 MBD4O95243 580 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 POU3F3P20264 500 aaPredicted RBP22.86■■□□□ 1.25
SORT1-203ENST00000471996 SLC4A3P48751 1232 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 CXCL17Q6UXB2 119 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 CPXCR1Q8N123 301 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 ANKRD35Q8N283 1001 aa22.86■■□□□ 1.25
SORT1-203ENST00000471996 DNAJC2Q99543 621 aaKnown RBP22.86■■□□□ 1.25
SORT1-203ENST00000471996 NOC4LQ9BVI4 516 aaKnown RBP22.86■■□□□ 1.25
SORT1-203ENST00000471996 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.86■■□□□ 1.25
SORT1-203ENST00000471996 ITGA7Q13683 1181 aa22.85■■□□□ 1.25
SORT1-203ENST00000471996 CCDC144CPQ8IYA2 1237 aa22.85■■□□□ 1.25
SORT1-203ENST00000471996 RPUSD2Q8IZ73 545 aaKnown RBP22.85■■□□□ 1.25
SORT1-203ENST00000471996 WNT8AQ9H1J5 351 aa22.85■■□□□ 1.25
SORT1-203ENST00000471996 IL1RAPL2Q9NP60 686 aa22.85■■□□□ 1.25
SORT1-203ENST00000471996 MTCH2Q9Y6C9 303 aa22.85■■□□□ 1.25
SORT1-203ENST00000471996 TCF20Q9UGU0 1960 aaKnown RBP22.85■■□□□ 1.25
SORT1-203ENST00000471996 REV3LO60673 3130 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 ZBED4O75132 1171 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 ADD2P35612 726 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 SLFNL1Q499Z3 407 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 TMEM31Q5JXX7 168 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 VWCEQ96DN2 955 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 SEZ6LQ9BYH1 1024 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 FBXO40Q9UH90 709 aa22.84■■□□□ 1.25
SORT1-203ENST00000471996 ASTN1O14525 1302 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 GRIN2DO15399 1336 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.83■■□□□ 1.25
SORT1-203ENST00000471996 F5H6K3 240 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 GTPBP6O43824 516 aaPredicted RBP22.83■■□□□ 1.25
SORT1-203ENST00000471996 ATP2A2P16615 1042 aaKnown RBP22.83■■□□□ 1.25
SORT1-203ENST00000471996 TNFAIP2Q03169 654 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 KLRC3Q07444 240 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 CHST13Q8NET6 341 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 TRPV6Q9H1D0 765 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 RAVER2Q9HCJ3 691 aaKnown RBP22.83■■□□□ 1.25
SORT1-203ENST00000471996 COG5Q9UP83 839 aa22.83■■□□□ 1.25
SORT1-203ENST00000471996 CTDP1Q9Y5B0 961 aaPredicted RBP22.83■■□□□ 1.25
SORT1-203ENST00000471996 ZBBXA8MT70 800 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 B4GALT4O60513 344 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 NDUFB10O96000 172 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 CTR9Q6PD62 1173 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 NOL8Q76FK4 1167 aaKnown RBP22.82■■□□□ 1.24
SORT1-203ENST00000471996 RHPN1Q8TCX5 695 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 SLC38A10Q9HBR0 1119 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 NYAP2Q9P242 653 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 GNEQ9Y223 722 aaKnown RBP22.82■■□□□ 1.24
SORT1-203ENST00000471996 MYH8P13535 1937 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 ZBED9Q6R2W3 1325 aa22.82■■□□□ 1.24
SORT1-203ENST00000471996 RFXAPO00287 272 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 TLL1O43897 1013 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 FSCN1Q16658 493 aaKnown RBP22.81■■□□□ 1.24
SORT1-203ENST00000471996 TMEM67Q5HYA8 995 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 ITPRIPQ8IWB1 547 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 KIFC2Q96AC6 838 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 GBF1Q92538 1859 aa22.81■■□□□ 1.24
SORT1-203ENST00000471996 CNTN2Q02246 1040 aa22.8■■□□□ 1.24
SORT1-203ENST00000471996 HSP90AB4PQ58FF6 505 aa22.8■■□□□ 1.24
SORT1-203ENST00000471996 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
SORT1-203ENST00000471996 FTSJ3Q8IY81 847 aaKnown RBP22.8■■□□□ 1.24
SORT1-203ENST00000471996 SCLYQ96I15 445 aa22.8■■□□□ 1.24
SORT1-203ENST00000471996 AGBL1Q96MI9 1066 aa22.8■■□□□ 1.24
SORT1-203ENST00000471996 ZEB2O60315 1214 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 CA3P07451 260 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 OAZ1P54368 228 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 CLASRPQ8N2M8 674 aaKnown RBP22.79■■□□□ 1.24
SORT1-203ENST00000471996 FAM133AQ8N9E0 248 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 AP5M1Q9H0R1 490 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 PAG1Q9NWQ8 432 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 SLC4A4Q9Y6R1 1079 aa22.79■■□□□ 1.24
SORT1-203ENST00000471996 GPR37L1O60883 481 aa22.78■■□□□ 1.24
SORT1-203ENST00000471996 PFKMP08237 780 aa22.78■■□□□ 1.24
SORT1-203ENST00000471996 TTLL4Q14679 1199 aa22.78■■□□□ 1.24
SORT1-203ENST00000471996 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.24
SORT1-203ENST00000471996 CERS4Q9HA82 394 aa22.78■■□□□ 1.24
SORT1-203ENST00000471996 FEM1BQ9UK73 627 aa22.78■■□□□ 1.24
SORT1-203ENST00000471996 EPOPA6NHQ4 379 aa22.77■■□□□ 1.24
SORT1-203ENST00000471996 DYNC1LI2O43237 492 aaPredicted RBP22.77■■□□□ 1.24
SORT1-203ENST00000471996 CHGBP05060 677 aa22.77■■□□□ 1.24
SORT1-203ENST00000471996 IFIT2P09913 472 aaKnown RBP22.77■■□□□ 1.24
SORT1-203ENST00000471996 UBE3CQ15386 1083 aa22.77■■□□□ 1.24
SORT1-203ENST00000471996 KRT40Q6A162 431 aa22.77■■□□□ 1.24
SORT1-203ENST00000471996 C11orf16Q9NQ32 467 aa22.77■■□□□ 1.24
SORT1-203ENST00000471996 ARPP21Q9UBL0 812 aaPredicted RBP22.77■■□□□ 1.24
SORT1-203ENST00000471996 BAZ2AQ9UIF9 1905 aaKnown RBP22.76■■□□□ 1.23
SORT1-203ENST00000471996 ASB14A6NK59 587 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 RLBP1P12271 317 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 SMPD1P17405 629 aa22.76■■□□□ 1.23
SORT1-203ENST00000471996 RASA1P20936 1047 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms