RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 CHST13Q8NET6 341 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 DDX11Q96FC9 970 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 FGD4Q96M96 766 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 CNPY2Q9Y2B0 182 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 ATP11BQ9Y2G3 1177 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 NEDD4P46934 1319 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 PLA2G6O60733 806 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 PGK1P00558 417 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-207ENST00000471704 AKR1A1P14550 325 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 MFAP1P55081 439 aaKnown RBP22.24■■□□□ 1.15
COMMD1-207ENST00000471704 PPP4R3BQ5MIZ7 849 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 KCTD1Q719H9 257 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 FERMT2Q96AC1 680 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 LBHD1Q9BQE6 289 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-207ENST00000471704 TOMM22Q9NS69 142 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 FBXO40Q9UH90 709 aa22.24■■□□□ 1.15
COMMD1-207ENST00000471704 CTDP1Q9Y5B0 961 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-207ENST00000471704 ADAMTS4O75173 837 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 SLC1A4P43007 532 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 STAT2P52630 851 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 TRIM60Q495X7 471 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 RNF180Q86T96 592 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 CHURC1Q8WUH1 139 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 TCP11L1Q9NUJ3 509 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 ZNF536O15090 1300 aa22.23■■□□□ 1.15
COMMD1-207ENST00000471704 HIP1O00291 1037 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 SLC4A3P48751 1232 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 FAM160B2Q86V87 743 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 LENG1Q96BZ8 264 aaPredicted RBP22.22■■□□□ 1.15
COMMD1-207ENST00000471704 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 PRKAG2Q9UGJ0 569 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 LRRC37A2A6NM11 1700 aa22.22■■□□□ 1.15
COMMD1-207ENST00000471704 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 ANKRD35Q8N283 1001 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 KLHDC9Q8NEP7 349 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 TSEN34Q9BSV6 310 aaKnown RBP22.21■■□□□ 1.15
COMMD1-207ENST00000471704 DSCC1Q9BVC3 393 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 PDLIM7Q9NR12 457 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 FAM184BQ9ULE4 1060 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 MTMR7Q9Y216 660 aa22.21■■□□□ 1.15
COMMD1-207ENST00000471704 SNAP25P60880 206 aa22.2■■□□□ 1.14
COMMD1-207ENST00000471704 TLE2Q04725 743 aa22.2■■□□□ 1.14
COMMD1-207ENST00000471704 CCSAPQ6IQ19 270 aaPredicted RBP22.2■■□□□ 1.14
COMMD1-207ENST00000471704 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.2■■□□□ 1.14
COMMD1-207ENST00000471704 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
COMMD1-207ENST00000471704 A0A1W2PQ45 241 aaPredicted RBP22.19■■□□□ 1.14
COMMD1-207ENST00000471704 A0A1W2PQY0 241 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 TRIM43BA6NCK2 446 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 ZNF213O14771 459 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 DUSP11O75319 330 aaKnown RBP22.19■■□□□ 1.14
COMMD1-207ENST00000471704 PCP11498 1178 aaKnown RBP22.19■■□□□ 1.14
COMMD1-207ENST00000471704 ACVR2BQ13705 512 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 TTBK2Q6IQ55 1244 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 SH3RF1Q7Z6J0 888 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 DEFB123Q8N688 67 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 FAM133AQ8N9E0 248 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 TRIM43Q96BQ3 446 aaPredicted RBP22.19■■□□□ 1.14
COMMD1-207ENST00000471704 AGBL1Q96MI9 1066 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 ABHD16BQ9H3Z7 469 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 PRR12Q9ULL5 1215 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 SYNRGQ9UMZ2 1314 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 A0A0C4DFX4 3053 aa22.19■■□□□ 1.14
COMMD1-207ENST00000471704 TOP1P11387 765 aaKnown RBP22.18■■□□□ 1.14
COMMD1-207ENST00000471704 TKFCQ3LXA3 575 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 Q7L0L9 218 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 DCAF4Q8WV16 495 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 ZKSCAN3Q9BRR0 538 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 KATNBL1Q9H079 304 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 ACAD9Q9H845 621 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 HOMER2Q9NSB8 354 aa22.18■■□□□ 1.14
COMMD1-207ENST00000471704 ADCY6O43306 1168 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 ACLYP53396 1101 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 CNTN2Q02246 1040 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 IKQ13123 557 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-207ENST00000471704 ARMCX2Q7L311 632 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 RNF41Q9H4P4 317 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-207ENST00000471704 A1CFQ9NQ94 594 aaKnown RBP22.17■■□□□ 1.14
COMMD1-207ENST00000471704 PRDM5Q9NQX1 630 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-207ENST00000471704 RNF146Q9NTX7 359 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 MTMR10Q9NXD2 777 aa22.17■■□□□ 1.14
COMMD1-207ENST00000471704 ZHX1Q9UKY1 873 aaPredicted RBP22.17■■□□□ 1.14
COMMD1-207ENST00000471704 FRMPD2Q68DX3 1309 aaPredicted RBP22.16■■□□□ 1.14
COMMD1-207ENST00000471704 POTEB2H3BUK9 544 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 PDHBP11177 359 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 CHMLP26374 656 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 CST5P28325 142 aaPredicted RBP22.16■■□□□ 1.14
COMMD1-207ENST00000471704 SLC16A2P36021 539 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 CCDC96Q2M329 555 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 CCDC144BQ3MJ40 725 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 BTNL9Q6UXG8 535 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 CCDC144CPQ8IYA2 1237 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 BADQ92934 168 aa22.16■■□□□ 1.14
COMMD1-207ENST00000471704 UPF3AQ9H1J1 476 aaKnown RBP22.16■■□□□ 1.14
COMMD1-207ENST00000471704 RAD50Q92878 1312 aa22.15■■□□□ 1.14
COMMD1-207ENST00000471704 MYADML2A6NDP7 307 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms