RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 BAHD1Q8TBE0 780 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 ENOX1Q8TC92 643 aaKnown RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 RSRP1Q9BUV0 290 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 DISC1Q9NRI5 854 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 GINM1Q9NU53 330 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 GTF2IRD1Q9UHL9 959 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 KCNG1Q9UIX4 513 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 PCOLCE2Q9UKZ9 415 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 PLAAQ9Y263 795 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 EFR3BQ9Y2G0 817 aa4.12□□□□□ -1.75
SCN3A-207ENST00000471697 MRPS23Q9Y3D9 190 aaKnown RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 R3HCC1Q9Y3T6 440 aaKnown RBP4.12□□□□□ -1.75
SCN3A-207ENST00000471697 PDPK1O15530 556 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 RASGRP1O95267 797 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CNGA1P29973 690 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 STAT3P40763 770 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CASP2P42575 452 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 RAB27AP51159 221 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 ID3Q02535 119 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 SIM2Q14190 667 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 GRAMD1BQ3KR37 738 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CCDC184Q52MB2 194 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 TM4SF20Q53R12 229 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 C2orf27AQ580R0 203 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 MEI1Q5TIA1 1274 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 ZKSCAN2Q63HK3 967 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 KSR2Q6VAB6 950 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 KIAA0825Q8IV33 1275 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 SPICE1Q8N0Z3 855 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 TOP6BLQ8N6T0 577 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 THAP3Q8WTV1 239 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CHAC2Q8WUX2 184 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 SNRNP27Q8WVK2 155 aaKnown RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CDC5LQ99459 802 aaKnown RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 OSBPL7Q9BZF2 842 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 XYLT2Q9H1B5 865 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 RSPH9Q9H1X1 276 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 DNAJC25Q9H1X3 360 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 CARS2Q9HA77 564 aaKnown RBP4.11□□□□□ -1.75
SCN3A-207ENST00000471697 PPCSQ9HAB8 311 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 IFT122Q9HBG6 1241 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 ADAMTS1Q9UHI8 967 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 TAGLN3Q9UI15 199 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 PCDHGC5Q9Y5F6 944 aa4.11□□□□□ -1.75
SCN3A-207ENST00000471697 A0A1W2PP55 124 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 CCDC85CA6NKD9 419 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 EIF1AYO14602 144 aaKnown RBP4.1□□□□□ -1.75
SCN3A-207ENST00000471697 AKAP10O43572 662 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 TRIM13O60858 407 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 MYL3P08590 195 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 SLFN14P0C7P3 912 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 GRIA4P48058 902 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 AP3B2Q13367 1082 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 PDE3AQ14432 1141 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 SPRED3Q2MJR0 410 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 CCDC70Q6NSX1 233 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 ERAP2Q6P179 960 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 GALNT12Q8IXK2 581 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 TCEAL8Q8IYN2 117 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 EAF1Q96JC9 268 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-207ENST00000471697 CAMKK2Q96RR4 588 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 TCF12Q99081 682 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 CAAP1Q9H8G2 361 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 PTPRHQ9HD43 1115 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 KBTBD4Q9NVX7 518 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 MCM8Q9UJA3 840 aa4.1□□□□□ -1.75
SCN3A-207ENST00000471697 A0A087X0B3 334 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 PRRT4C9JH25 899 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 ASMTLO95671 621 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 HTR3AP46098 478 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 PURAQ00577 322 aaKnown RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 EFEMP1Q12805 493 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 CNGB1Q14028 1251 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 TTLL4Q14679 1199 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 KIF4BQ2VIQ3 1234 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 ALFQ53S48 1182 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 TNNI3KQ59H18 835 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 FAM83BQ5T0W9 1011 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 TCERG1LQ5VWI1 586 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 NXNQ6DKJ4 435 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 GET4Q7L5D6 327 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 SMAP1Q8IYB5 467 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 CELF2-AS1Q8N7Q2 184 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 CCDC89Q8N998 374 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 ABHD4Q8TB40 342 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 SECISBP2LQ93073 1101 aaKnown RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 NOC4LQ9BVI4 516 aaKnown RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 NT5C1AQ9BXI3 368 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 CDH19Q9H159 772 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 AS3MTQ9HBK9 375 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 NGRNQ9NPE2 291 aaKnown RBP4.09□□□□□ -1.75
SCN3A-207ENST00000471697 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 FAM8A1Q9UBU6 413 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 CD2APQ9Y5K6 639 aa4.09□□□□□ -1.75
SCN3A-207ENST00000471697 E2F8A0AVK6 867 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 BICDL2A1A5D9 508 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 GOLGA6CA6NDK9 693 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 GOLGA6BA6NDN3 693 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms