RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CTAGE1Q96RT6 745 aa21.05■□□□□ 0.96
COL20A1-205ENST00000471582 MTFR1LQ9H019 292 aa21.05■□□□□ 0.96
COL20A1-205ENST00000471582 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
COL20A1-205ENST00000471582 TRMT1Q9NXH9 659 aaKnown RBP21.05■□□□□ 0.96
COL20A1-205ENST00000471582 SMCO2A6NFE2 343 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 USP17L5A8MUK1 530 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 STAT6P42226 847 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 NR1I3Q14994 352 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 SYCP1Q15431 976 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 TEKT1Q969V4 418 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 PPP1R13BQ96KQ4 1090 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 TMEM60Q9H2L4 133 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 DBNDD1Q9H9R9 158 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 USP40Q9NVE5 1235 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 ZNF219Q9P2Y4 722 aaPredicted RBP21.04■□□□□ 0.96
COL20A1-205ENST00000471582 ZBTB7AO95365 584 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 APTXQ7Z2E3 356 aaKnown RBP21.04■□□□□ 0.96
COL20A1-205ENST00000471582 MAGEF1Q9HAY2 307 aa21.04■□□□□ 0.96
COL20A1-205ENST00000471582 GREB1LQ9C091 1923 aaPredicted RBP21.03■□□□□ 0.96
COL20A1-205ENST00000471582 AKR1B1P15121 316 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 POLD1P28340 1107 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 FKBP1AP62942 108 aaKnown RBP21.03■□□□□ 0.96
COL20A1-205ENST00000471582 GRIPAP1Q4V328 841 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 HSP90AA4PQ58FG1 418 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 PPP4R3BQ5MIZ7 849 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 ZNF658Q5TYW1 1059 aaPredicted RBP21.03■□□□□ 0.96
COL20A1-205ENST00000471582 HOMER1Q86YM7 354 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 PIGSQ96S52 555 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 EHD4Q9H223 541 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 CPVLQ9H3G5 476 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 CUEDC2Q9H467 287 aa21.03■□□□□ 0.96
COL20A1-205ENST00000471582 TTLL1O95922 423 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 RPN1P04843 607 aaKnown RBP21.02■□□□□ 0.96
COL20A1-205ENST00000471582 UBA7P41226 1012 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 KARSQ15046 597 aaKnown RBP21.02■□□□□ 0.96
COL20A1-205ENST00000471582 STRIP1Q5VSL9 837 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 KLHL10Q6JEL2 608 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 CDC42EP5Q6NZY7 148 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 NEK8Q86SG6 692 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 TTLL6Q8N841 843 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 KIF18AQ8NI77 898 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 MRIQ9BWK5 157 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 BLZF1Q9H2G9 400 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 RWDD2AQ9UIY3 292 aa21.02■□□□□ 0.96
COL20A1-205ENST00000471582 ARHGAP6O43182 974 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 ECE2O60344 883 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 OR52Z1P0C646 297 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 R3HDM1Q15032 1099 aaKnown RBP21.02■□□□□ 0.95
COL20A1-205ENST00000471582 NAALADL2Q58DX5 795 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 RRAGBQ5VZM2 374 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.95
COL20A1-205ENST00000471582 PPP1R18Q6NYC8 613 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 TMEM139Q8IV31 216 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 REXO1Q8N1G1 1221 aaKnown RBP21.02■□□□□ 0.95
COL20A1-205ENST00000471582 STAMQ92783 540 aa21.02■□□□□ 0.95
COL20A1-205ENST00000471582 ADAMTSL1Q8N6G6 1762 aa21.01■□□□□ 0.95
COL20A1-205ENST00000471582 HLA-DOAP06340 250 aa21.01■□□□□ 0.95
COL20A1-205ENST00000471582 KCNB1Q14721 858 aa21.01■□□□□ 0.95
COL20A1-205ENST00000471582 ADD3Q9UEY8 706 aaKnown RBP21.01■□□□□ 0.95
COL20A1-205ENST00000471582 STX10O60499 249 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 SHMT1P34896 483 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 SMYD4Q8IYR2 804 aaPredicted RBP21■□□□□ 0.95
COL20A1-205ENST00000471582 ZNF592Q92610 1267 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 MXD3Q9BW11 206 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 CTNND2Q9UQB3 1225 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 DPEP1P16444 411 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 CDC25AP30304 524 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 SCNN1DP51172 638 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 SPAG1Q07617 926 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 PAK1Q13153 545 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 ZNF710Q8N1W2 664 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 TC2NQ8N9U0 490 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 KBTBD4Q9NVX7 518 aa21■□□□□ 0.95
COL20A1-205ENST00000471582 CCNT1O60563 726 aaKnown RBP20.99■□□□□ 0.95
COL20A1-205ENST00000471582 KCNA3P22001 575 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 PBX1P40424 430 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 STX17P56962 302 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 TGFB2P61812 414 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
COL20A1-205ENST00000471582 ZNF543Q08ER8 600 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 LETM2Q2VYF4 491 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 FILIP1LQ4L180 1135 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 LRRC47Q8N1G4 583 aaKnown RBP20.99■□□□□ 0.95
COL20A1-205ENST00000471582 RASSF8Q8NHQ8 419 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 CCDC17Q96LX7 622 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 UBA5Q9GZZ9 404 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 VAT1LQ9HCJ6 419 aa20.99■□□□□ 0.95
COL20A1-205ENST00000471582 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
COL20A1-205ENST00000471582 PRKCSHP14314 528 aaPredicted RBP20.98■□□□□ 0.95
COL20A1-205ENST00000471582 CRKP46108 304 aa20.98■□□□□ 0.95
COL20A1-205ENST00000471582 GPATCH4Q5T3I0 446 aaKnown RBP20.98■□□□□ 0.95
COL20A1-205ENST00000471582 TSC1Q92574 1164 aa20.98■□□□□ 0.95
COL20A1-205ENST00000471582 BAG1Q99933 345 aaPredicted RBP20.98■□□□□ 0.95
COL20A1-205ENST00000471582 SCN9AQ15858 1988 aa20.98■□□□□ 0.95
COL20A1-205ENST00000471582 FRMPD2Q68DX3 1309 aaPredicted RBP20.98■□□□□ 0.95
COL20A1-205ENST00000471582 LRRC10BA6NIK2 292 aa20.98■□□□□ 0.95
COL20A1-205ENST00000471582 ZSCAN12O43309 604 aa20.98■□□□□ 0.95
COL20A1-205ENST00000471582 C21orf2O43822 256 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms