RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 LPAR1Q92633 364 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.69□□□□□ -0.22
LINC00880-201ENST00000471357 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 SCN4AP35499 1836 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 CCDC194A0A1B0GVG4 234 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 ADCY7P51828 1080 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 SPP2Q13103 211 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 ZNF280CQ8ND82 737 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 DOCK1Q14185 1865 aa13.69□□□□□ -0.22
LINC00880-201ENST00000471357 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
LINC00880-201ENST00000471357 LIG1P18858 919 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 MARCKSP29966 332 aaPredicted RBP13.68□□□□□ -0.22
LINC00880-201ENST00000471357 NF2P35240 595 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 MTMR2Q13614 643 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 ZHX2Q9Y6X8 837 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
LINC00880-201ENST00000471357 BACE1P56817 501 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 SNAP25P60880 206 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
LINC00880-201ENST00000471357 REXO1Q8N1G1 1221 aaKnown RBP13.68□□□□□ -0.22
LINC00880-201ENST00000471357 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
LINC00880-201ENST00000471357 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 BMP15O95972 392 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 ZNF174Q15697 407 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 AXDND1Q5T1B0 1012 aaPredicted RBP13.67□□□□□ -0.22
LINC00880-201ENST00000471357 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 CUL5Q93034 780 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
LINC00880-201ENST00000471357 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
LINC00880-201ENST00000471357 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 TRAF1Q13077 416 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 JAKMIP3Q5VZ66 844 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 RANBP17Q9H2T7 1088 aaKnown RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 MORC2Q9Y6X9 1032 aaPredicted RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 WNT7AO00755 349 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 CUTAO60888 179 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 DGKZQ13574 1117 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 VGLL4Q14135 290 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 INF2Q27J81 1249 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 FSIP1Q8NA03 581 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 MRPS27Q92552 414 aaKnown RBP13.66□□□□□ -0.22
LINC00880-201ENST00000471357 FBXO28Q9NVF7 368 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 DACT1Q9NYF0 836 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 CSADQ9Y600 493 aa13.66□□□□□ -0.22
LINC00880-201ENST00000471357 NR1I2O75469 434 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 VCAM1P19320 739 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 PTPREP23469 700 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 CMA1P23946 247 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 USH1GQ495M9 461 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
LINC00880-201ENST00000471357 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 DDX19AQ9NUU7 478 aaKnown RBP13.65□□□□□ -0.22
LINC00880-201ENST00000471357 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 AFG3L2Q9Y4W6 797 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
LINC00880-201ENST00000471357 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 CLK2P49760 499 aaKnown RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 ZNF445P59923 1031 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 CLIC6Q96NY7 704 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 SRPRBQ9Y5M8 271 aaKnown RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 SYCE3A1L190 88 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 MCM7P33993 719 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 HMGCS2P54868 508 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 PTGDRQ13258 359 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 TTLL12Q14166 644 aaPredicted RBP13.64□□□□□ -0.23
LINC00880-201ENST00000471357 UBE2SQ16763 222 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
LINC00880-201ENST00000471357 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms