RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 PTPN18Q99952 460 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 ASCC2Q9H1I8 757 aaPredicted RBP13.42□□□□□ -0.26
FN1-217ENST00000471193 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 ZNF536O15090 1300 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 STXBP3O00186 592 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 PDHXO00330 501 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.265e-71■□□□□ 8.2
FN1-217ENST00000471193 PDCP20941 246 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 OSBPP22059 807 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 HERVK_113P62684 666 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 NOGQ13253 232 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 DEFB115Q30KQ5 88 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 HEATR3Q7Z4Q2 680 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 FAM177A1Q8N128 213 aaPredicted RBP13.41□□□□□ -0.26
FN1-217ENST00000471193 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 C8orf76Q96K31 380 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 CAPNS2Q96L46 248 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
FN1-217ENST00000471193 SH3GLB2Q9NR46 395 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 BARHL2Q9NY43 387 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 HOXC10Q9NYD6 342 aa13.41□□□□□ -0.26
FN1-217ENST00000471193 ZBED4O75132 1171 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 ICAM1P05362 532 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 SYT1P21579 422 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 FOSBP53539 338 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 OAZ1P54368 228 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 INHBEP58166 350 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
FN1-217ENST00000471193 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
FN1-217ENST00000471193 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
FN1-217ENST00000471193 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
FN1-217ENST00000471193 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
FN1-217ENST00000471193 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 STX6O43752 255 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 CYP2C8P10632 490 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 XBP1P17861 261 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 NAPAP54920 295 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 KIF23Q02241 960 aaPredicted RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 TRAF1Q13077 416 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 GRM1Q13255 1194 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 TRIM29Q14134 588 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 KRT40Q6A162 431 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 COA7Q96BR5 231 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 ZIC5Q96T25 663 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 PARK7Q99497 189 aaKnown RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 PNMA2Q9UL42 364 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
FN1-217ENST00000471193 ABCB11O95342 1321 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
FN1-217ENST00000471193 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
FN1-217ENST00000471193 ESYT2A0FGR8 921 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
FN1-217ENST00000471193 AOC2O75106 756 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 CNMDO75829 334 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 MMP1P03956 469 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
FN1-217ENST00000471193 TM4SF4P48230 202 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 PKP1Q13835 747 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 NPY5RQ15761 445 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 USH1GQ495M9 461 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 RAVER2Q9HCJ3 691 aaKnown RBP13.38□□□□□ -0.27
FN1-217ENST00000471193 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 KCNJ14Q9UNX9 436 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
FN1-217ENST00000471193 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
FN1-217ENST00000471193 H3BQV1 296 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 BRD1O95696 1058 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 HTRA3P83110 453 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
FN1-217ENST00000471193 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
FN1-217ENST00000471193 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 DAGLBQ8NCG7 672 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
FN1-217ENST00000471193 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 ZMYND12Q9H0C1 365 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms