RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TOM1L1O75674 476 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 INHBAP08476 426 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 MCF2P10911 925 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 HSPA8P11142 646 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 THOC5Q13769 683 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NSMFQ6X4W1 530 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TRIML2Q8N7C3 387 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NELFBQ8WX92 580 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 GEMIN8Q9NWZ8 242 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ERBINQ96RT1 1412 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 PLEKHH2Q8IVE3 1493 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 KRT8P05787 483 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ACTN1P12814 892 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NCF2P19878 526 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 IFNA8P32881 189 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 RARSP54136 660 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM67Q6ZTA4 783 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF467Q7Z7K2 595 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 DDX28Q9NUL7 540 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TFCP2L1Q9NZI6 479 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 KIF17Q9P2E2 1029 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 WARS2Q9UGM6 360 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 SGK1O00141 431 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ARPP19P56211 112 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NSUN2Q08J23 767 aaKnown RBP eCLIP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 SPOPLQ6IQ16 392 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ARMC9Q7Z3E5 817 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 GOLGA5Q8TBA6 731 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 CAPS2Q9BXY5 557 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM8Q9BZR9 551 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM15Q9C019 465 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NLRC4Q9NPP4 1024 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 FAM207AQ9NSI2 230 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF644Q9H582 1327 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 ZSCAN9O15535 394 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 FANCCQ00597 558 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 EAPPQ56P03 285 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 BBS5Q8N3I7 341 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NAF1Q96HR8 494 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 NYXQ9GZU5 481 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 YY1AP1Q9H869 796 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 CHCHD3Q9NX63 227 aaKnown RBP7.52□□□□□ -1.21
BRCA1-210ENST00000471181 STRIP2Q9ULQ0 834 aa7.52□□□□□ -1.21
BRCA1-210ENST00000471181 TCIRG1Q13488 830 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 KIF19Q2TAC6 998 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PLEKHM3Q6ZWE6 761 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TPH2Q8IWU9 490 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 IFNL2Q8IZJ0 200 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF513Q8N8E2 541 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CFAP36Q96G28 342 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 RBM17Q96I25 401 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 RPS6KC1Q96S38 1066 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 IFIH1Q9BYX4 1025 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 SLC7A5P2Q9GIP4 190 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 BLZF1Q9H2G9 400 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PRR23D1E9PI22 279 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ORC4O43929 436 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 DDAH1O94760 285 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PRR23D2P0DMB1 279 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 POLR2BP30876 1174 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ADCY7P51828 1080 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PSMC1P62191 440 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 KIAA2013Q8IYS2 634 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 FLCNQ8NFG4 579 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 E2F6O75461 281 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 SNRPA1P09661 255 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 SDSP20132 328 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 PDE6CP51160 858 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 FAM133BQ5BKY9 247 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 NLRP9Q7RTR0 991 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TTC6Q86TZ1 520 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 HESX1Q9UBX0 185 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 STK24Q9Y6E0 443 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 POLR2DO15514 142 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 KRT14P02533 472 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 HNRNPCP07910 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 IFNAR2P48551 515 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 LIG4P49917 911 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 MTX1Q13505 466 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 SF3B3Q15393 1217 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TAF11Q15544 211 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TJAP1Q5JTD0 557 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CERS3Q8IU89 383 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TYW1Q9NV66 732 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 STX18Q9P2W9 335 aaKnown RBP7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF148Q9UQR1 794 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ARAP1Q96P48 1450 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 ERCC6L2Q5T890 1561 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 POTEB3A0JP26 581 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CPP00450 1065 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TCF3P15923 654 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 DDIT3P35638 169 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 IL9RQ01113 521 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 TMED2Q15363 201 aa7.51□□□□□ -1.21
BRCA1-210ENST00000471181 CALCRLQ16602 461 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms