RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GDF11O95390 407 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 CCNA1P78396 465 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 EXOSC9Q06265 439 aaKnown RBP7.26□□□□□ -1.25
VARS-222ENST00000470953 GTF3C2Q8WUA4 911 aaPredicted RBP7.26□□□□□ -1.25
VARS-222ENST00000470953 VTI1AQ96AJ9 217 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 MAML3Q96JK9 1138 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 AGBL1Q96MI9 1066 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 C17orf80Q9BSJ5 609 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 MOV10L1Q9BXT6 1211 aaKnown RBP7.26□□□□□ -1.25
VARS-222ENST00000470953 ATG2AQ2TAZ0 1938 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 SIPA1L1O43166 1804 aa7.26□□□□□ -1.25
VARS-222ENST00000470953 ROBO3Q96MS0 1386 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 LINC01553A4QN01 128 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 SPDYE16A6NNV3 312 aaPredicted RBP7.25□□□□□ -1.25
VARS-222ENST00000470953 CCER2I3L3R5 266 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 PFKMP08237 780 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 IFIT1P09914 478 aaKnown RBP7.25□□□□□ -1.25
VARS-222ENST00000470953 PMLP29590 882 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 ICAM3P32942 547 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 PUM3Q15397 648 aaKnown RBP7.25□□□□□ -1.25
VARS-222ENST00000470953 CTC1Q2NKJ3 1217 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 DIEXFQ68CQ4 756 aaKnown RBP7.25□□□□□ -1.25
VARS-222ENST00000470953 CATSPERGQ6ZRH7 1159 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 FBXO22Q8NEZ5 403 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 FAM163AQ96GL9 167 aaPredicted RBP7.25□□□□□ -1.25
VARS-222ENST00000470953 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 IGSF10Q6WRI0 2623 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 KIF16BQ96L93 1317 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 SALL1Q9NSC2 1324 aa7.25□□□□□ -1.25
VARS-222ENST00000470953 LAMA5O15230 3695 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 GPR75-ASB3A0A0A6YYF3 556 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 SRRM3A6NNA2 597 aaPredicted RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 E9PSI1 815 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 ASGR1P07306 291 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 ASNSP08243 561 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 NBPF7P0C2Y1 421 aaPredicted RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 ZNF865P0CJ78 1059 aaPredicted RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 ERCC3P19447 782 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 PHKA1P46020 1223 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 ZNF200P98182 395 aaPredicted RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 PTPROQ16827 1216 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 LBX2Q6XYB7 198 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 ANKRD44Q8N8A2 993 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 RPGRIP1Q96KN7 1286 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 BICC1Q9H694 974 aaKnown RBP7.24□□□□□ -1.25
VARS-222ENST00000470953 CD207Q9UJ71 328 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 MYO7AQ13402 2215 aa7.24□□□□□ -1.25
VARS-222ENST00000470953 MYO18BQ8IUG5 2567 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 PTPN13Q12923 2485 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 PRR5-ARHGAP8B1AHC4 643 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 LINC01565O15544 149 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ADCY6O43306 1168 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 NPM3O75607 178 aaKnown RBP7.23□□□□□ -1.25
VARS-222ENST00000470953 PGK2P07205 417 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ACTN1P12814 892 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 VCAM1P19320 739 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 KCNA4P22459 653 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ARHGAP8P85298 464 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 SHC2P98077 582 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 MECOMQ03112 1051 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 LARP1BQ659C4 914 aaKnown RBP7.23□□□□□ -1.25
VARS-222ENST00000470953 CWF19L1Q69YN2 538 aaKnown RBP7.23□□□□□ -1.25
VARS-222ENST00000470953 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 UNQ6494/PRO21346Q6UXR6 183 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 CCDC105Q8IYK2 499 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 SUMF1Q8NBK3 374 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ACER1Q8TDN7 264 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 C12orf42Q96LP6 360 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ZBED2Q9BTP6 218 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 TRPV6Q9H1D0 765 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 SMOC2Q9H3U7 446 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 CTNNA3Q9UI47 895 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ZBTB21Q9ULJ3 1066 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 MROH7-TTC4A0A0A0MT08 1334 aa7.23□□□□□ -1.25
VARS-222ENST00000470953 ZNFX1Q9P2E3 1918 aaKnown RBP7.23□□□□□ -1.25
VARS-222ENST00000470953 PI15O43692 258 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 STRNO43815 780 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 B4GALT4O60513 344 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 AKR1A1P14550 325 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 ADORA1P30542 326 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
VARS-222ENST00000470953 CLCN5P51795 746 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 DEFB103AP81534 67 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 HYAL1Q12794 435 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 RABL6Q3YEC7 729 aaPredicted RBP7.22□□□□□ -1.25
VARS-222ENST00000470953 ZBTB33Q86T24 672 aa7.22□□□□□ -1.25
VARS-222ENST00000470953 DZIP1Q86YF9 867 aaKnown RBP7.22□□□□□ -1.25
VARS-222ENST00000470953 KDF1Q8NAX2 398 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms