RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 RBM5P52756 815 aaKnown RBP eCLIP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 FGD1P98174 961 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 PDE4BQ07343 736 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 PPARAQ07869 468 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 SART3Q15020 963 aaKnown RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 GRIK5Q16478 980 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 AKNAD1Q5T1N1 836 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 MFSD6Q6ZSS7 791 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 DHX32Q7L7V1 743 aaKnown RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 KRT26Q7Z3Y9 468 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 FBXL16Q8N461 479 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 SH3RF3Q8TEJ3 882 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 SDR42E1Q8WUS8 393 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 GMLQ99445 158 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 UPF3BQ9BZI7 483 aaKnown RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 EPB41L4AQ9HCS5 686 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 KCNQ5Q9NR82 932 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 SH2B1Q9NRF2 756 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 MINDY4BA8MYZ0 360 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 USP17L21D6R901 530 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 PRKAB2O43741 272 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 RHBDL3P58872 404 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 HAND2P61296 217 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 DLGAP5Q15398 846 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 ADCK5Q3MIX3 580 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 TBC1D10BQ4KMP7 808 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-202ENST00000470357 FKBP1CQ5VVH2 108 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 TTC6Q86TZ1 520 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 C2orf69Q8N8R5 385 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 TGFBRAP1Q8WUH2 860 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 STAG1Q8WVM7 1258 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 ESR2Q92731 530 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 TTC14Q96N46 770 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 DHX36Q9H2U1 1008 aaKnown RBP7.79□□□□□ -1.16
VAMP3-202ENST00000470357 USP40Q9NVE5 1235 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 MCM9Q9NXL9 1143 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 LIMCH1Q9UPQ0 1083 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 ROBO3Q96MS0 1386 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 CENPFP49454 3210 aa7.79□□□□□ -1.16
VAMP3-202ENST00000470357 COL2A1P02458 1487 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-202ENST00000470357 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
VAMP3-202ENST00000470357 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 ERICH2A1L162 156 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 A6NJR5 290 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 PIK3CDO00329 1044 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 ORC4O43929 436 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 MAN1A2O60476 641 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 POLR3DP05423 398 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 HLA-DOAP06340 250 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 CTSOP43234 321 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 PKN2Q16513 984 aaKnown RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 CFAP100Q494V2 611 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 HABP4Q5JVS0 413 aaKnown RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 C12orf60Q5U649 245 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 APOBEC3HQ6NTF7 200 aaKnown RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 CDC42EP5Q6NZY7 148 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 CTR9Q6PD62 1173 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 IQCA1Q86XH1 822 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 TMTC2Q8N394 836 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 ADAMTS19Q8TE59 1207 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-202ENST00000470357 MXD3Q9BW11 206 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 IDI2Q9BXS1 227 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 FLT1P17948 1338 aa7.78□□□□□ -1.16
VAMP3-202ENST00000470357 ENTPD3O75355 529 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 WDHD1O75717 1129 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 FGRP09769 529 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 PDIA4P13667 645 aaKnown RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 ZNF280AP59817 542 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 TNFAIP1Q13829 316 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 OXLD1Q5BKU9 147 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 TBC1D10CQ8IV04 446 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 MAPKAPK5Q8IW41 473 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 MB21D2Q8IYB1 491 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 INTS4Q96HW7 963 aaKnown RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 AGXT2Q9BYV1 514 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 CWC22Q9HCG8 908 aaKnown RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
VAMP3-202ENST00000470357 TOMM22Q9NS69 142 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 SWAP70Q9UH65 585 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
VAMP3-202ENST00000470357 A0A1W2PRU2 124 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 B4E1Z4 1266 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 PRC1O43663 620 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 TRAK2O60296 914 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 TBC1D8O95759 1140 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 MYCP01106 439 aaPredicted RBP7.76□□□□□ -1.17
VAMP3-202ENST00000470357 LIFRP42702 1097 aa7.76□□□□□ -1.17
VAMP3-202ENST00000470357 TNNI2P48788 182 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms