RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TAL1P17542 331 aaPredicted RBP12.26□□□□□ -0.45
SMC1A-206ENST00000470241 STAT3P40763 770 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 OAZ1P54368 228 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
SMC1A-206ENST00000470241 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 PIGSQ96S52 555 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
SMC1A-206ENST00000470241 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
SMC1A-206ENST00000470241 RIPK3Q9Y572 518 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
SMC1A-206ENST00000470241 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 PPP1R11O60927 126 aaPredicted RBP12.25□□□□□ -0.45
SMC1A-206ENST00000470241 ICAM1P05362 532 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 CTGFP29279 349 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 CAP1Q01518 475 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 SP3Q02447 781 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 PLS1Q14651 629 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 SNRNP48Q6IEG0 339 aaKnown RBP12.25□□□□□ -0.45
SMC1A-206ENST00000470241 HOMER1Q86YM7 354 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
SMC1A-206ENST00000470241 PIBF1Q8WXW3 757 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 GTF3C6Q969F1 213 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 TEX13BQ9BXU2 312 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 PORCNQ9H237 461 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
SMC1A-206ENST00000470241 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
SMC1A-206ENST00000470241 hCG_1642624A0A1W2PR95 340 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 ZBTB5O15062 677 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 FKTNO75072 461 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 IFNAR1P17181 557 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 ERCC3P19447 782 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 CTCFP49711 727 aaPredicted RBP12.24□□□□□ -0.45
SMC1A-206ENST00000470241 MCM2P49736 904 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 CCNA1P78396 465 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 LACTBP83111 547 aaPredicted RBP12.24□□□□□ -0.45
SMC1A-206ENST00000470241 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
SMC1A-206ENST00000470241 ZSCAN31Q96LW9 406 aaPredicted RBP12.24□□□□□ -0.45
SMC1A-206ENST00000470241 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 CCPG1Q9ULG6 757 aa12.24□□□□□ -0.45
SMC1A-206ENST00000470241 V9GY48 417 aaPredicted RBP12.24□□□□□ -0.45
SMC1A-206ENST00000470241 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 DTNBO60941 627 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 PPFIA3O75145 1194 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
SMC1A-206ENST00000470241 SLC25A27O95847 323 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 PHKBQ93100 1093 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
SMC1A-206ENST00000470241 SH2B1Q9NRF2 756 aaPredicted RBP12.23□□□□□ -0.45
SMC1A-206ENST00000470241 CPLX1O14810 134 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
SMC1A-206ENST00000470241 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-206ENST00000470241 ALAS1P13196 640 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 MAPK4P31152 587 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 COPB2P35606 906 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 PSMC4P43686 418 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 LBX1P52954 281 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 TKFCQ3LXA3 575 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 USH1GQ495M9 461 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
SMC1A-206ENST00000470241 FBXO11Q86XK2 927 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 SNX21Q969T3 373 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 AMNQ9BXJ7 453 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 RNF26Q9BY78 433 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-206ENST00000470241 MROH8Q9H579 483 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 RNF146Q9NTX7 359 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
SMC1A-206ENST00000470241 PNMA2Q9UL42 364 aa12.22□□□□□ -0.45
SMC1A-206ENST00000470241 ABCB11O95342 1321 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 FCGRTP55899 365 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 PKN1Q16512 942 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 PFKFB3Q16875 520 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-206ENST00000470241 MUM1L1Q5H9M0 696 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMC1A-206ENST00000470241 GPR142Q7Z601 462 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 CCAR1Q8IX12 1150 aaKnown RBP12.21□□□□□ -0.45
SMC1A-206ENST00000470241 NSUN7Q8NE18 718 aaKnown RBP12.21□□□□□ -0.45
SMC1A-206ENST00000470241 CHST13Q8NET6 341 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 CLEC4DQ8WXI8 215 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 COA7Q96BR5 231 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 ERO1AQ96HE7 468 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 HOMER2Q9NSB8 354 aa12.21□□□□□ -0.45
SMC1A-206ENST00000470241 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms