RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CCDC84Q86UT8 332 aaPredicted RBP20.71■□□□□ 0.91
SMC4-211ENST00000469858 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
SMC4-211ENST00000469858 ADCY7P51828 1080 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 PTGDRQ13258 359 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 PPP1R18Q6NYC8 613 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 KRT25Q7Z3Z0 450 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 APOBEC3FQ8IUX4 373 aaKnown RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 REXO1Q8N1G1 1221 aaKnown RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 SDF4Q9BRK5 362 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 ATP2C1P98194 919 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 TYRO3Q06418 890 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 ZYXQ15942 572 aaKnown RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 NBPF12Q5TAG4 269 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 GGA3Q9NZ52 723 aa20.7■□□□□ 0.9
SMC4-211ENST00000469858 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
SMC4-211ENST00000469858 FAM237AA0A1B0GTK4 181 aa20.69■□□□□ 0.9
SMC4-211ENST00000469858 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
SMC4-211ENST00000469858 JAKMIP3Q5VZ66 844 aa20.69■□□□□ 0.9
SMC4-211ENST00000469858 SASS6Q6UVJ0 657 aa20.69■□□□□ 0.9
SMC4-211ENST00000469858 ZNF579Q8NAF0 562 aaKnown RBP20.69■□□□□ 0.9
SMC4-211ENST00000469858 GLIS2Q9BZE0 524 aaPredicted RBP20.69■□□□□ 0.9
SMC4-211ENST00000469858 CSRNP2Q9H175 543 aa20.69■□□□□ 0.9
SMC4-211ENST00000469858 NONOQ15233 471 aaKnown RBP eCLIP20.68■□□□□ 0.92e-8■■■■■ 98.1
SMC4-211ENST00000469858 SH2D4AQ9H788 454 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 TMEM260Q9NX78 707 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 FAM13BQ9NYF5 915 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 KCNH3Q9ULD8 1083 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 POLR2AP24928 1970 aaKnown RBP20.68■□□□□ 0.9
SMC4-211ENST00000469858 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
SMC4-211ENST00000469858 SNAP25P60880 206 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 FAM83BQ5T0W9 1011 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 PRAMEF18Q5VWM3 479 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 FERMT2Q96AC1 680 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 VCPKMTQ9H867 229 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 SRCAPQ6ZRS2 3230 aa20.68■□□□□ 0.9
SMC4-211ENST00000469858 STAT2P52630 851 aa20.67■□□□□ 0.9
SMC4-211ENST00000469858 ERCC4Q92889 916 aaPredicted RBP20.67■□□□□ 0.9
SMC4-211ENST00000469858 DOCK1Q14185 1865 aa20.67■□□□□ 0.9
SMC4-211ENST00000469858 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 DCAF15Q66K64 600 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 BTNL9Q6UXG8 535 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 CUL5Q93034 780 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 FEZ1Q99689 392 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 ZNF341Q9BYN7 854 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 RIC8AQ9NPQ8 531 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 PCDHA1Q9Y5I3 950 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
SMC4-211ENST00000469858 TIGD1Q96MW7 591 aa20.66■□□□□ 0.9
SMC4-211ENST00000469858 CTNND1O60716 968 aaKnown RBP20.65■□□□□ 0.9
SMC4-211ENST00000469858 UBE2SQ16763 222 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 LETM2Q2VYF4 491 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 USP49Q70CQ1 688 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 NEK8Q86SG6 692 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 TBCKQ8TEA7 893 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 PRR12Q9ULL5 1215 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 INPP5BP32019 993 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
SMC4-211ENST00000469858 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 PSTPIP2Q9H939 334 aa20.65■□□□□ 0.9
SMC4-211ENST00000469858 CCNT1O60563 726 aaKnown RBP20.64■□□□□ 0.89
SMC4-211ENST00000469858 MRPL12P52815 198 aaKnown RBP20.64■□□□□ 0.89
SMC4-211ENST00000469858 USH1GQ495M9 461 aa20.64■□□□□ 0.89
SMC4-211ENST00000469858 ANO6Q4KMQ2 910 aa20.64■□□□□ 0.89
SMC4-211ENST00000469858 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
SMC4-211ENST00000469858 C4orf32Q8N8J7 132 aa20.64■□□□□ 0.89
SMC4-211ENST00000469858 POLR2DO15514 142 aaKnown RBP20.63■□□□□ 0.89
SMC4-211ENST00000469858 LONRF3Q496Y0 759 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 ARL6IP4Q66PJ3 421 aaKnown RBP20.63■□□□□ 0.89
SMC4-211ENST00000469858 PDILTQ8N807 584 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 CNNM3Q8NE01 707 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 SYMPKQ92797 1274 aaKnown RBP20.63■□□□□ 0.89
SMC4-211ENST00000469858 HOOK2Q96ED9 719 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 EPSTI1Q96J88 318 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 MYH7BA7E2Y1 1941 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 CLK2P49760 499 aaKnown RBP20.63■□□□□ 0.89
SMC4-211ENST00000469858 IL17AQ16552 155 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 KRBA2Q6ZNG9 492 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 TMEM60Q9H2L4 133 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
SMC4-211ENST00000469858 GINM1Q9NU53 330 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 KIAA1468Q9P260 1216 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 FZD1Q9UP38 647 aa20.63■□□□□ 0.89
SMC4-211ENST00000469858 SMCHD1A6NHR9 2005 aa20.62■□□□□ 0.89
SMC4-211ENST00000469858 KIFC2Q96AC6 838 aa20.62■□□□□ 0.89
SMC4-211ENST00000469858 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
SMC4-211ENST00000469858 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
SMC4-211ENST00000469858 A0A087WWV3 80 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 TAL1P17542 331 aaPredicted RBP20.61■□□□□ 0.89
SMC4-211ENST00000469858 STX1AQ16623 288 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 SAMD1Q6SPF0 538 aaPredicted RBP20.61■□□□□ 0.89
SMC4-211ENST00000469858 CHURC1Q8WUH1 139 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 DNAJC25Q9H1X3 360 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L15C9J2P7 530 aa20.61■□□□□ 0.89
SMC4-211ENST00000469858 USP17L13C9JLJ4 530 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms