RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
CBWD3-205ENST00000469687 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
CBWD3-205ENST00000469687 FRMPD2Q68DX3 1309 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-205ENST00000469687 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 N4BP3O15049 544 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 KLRC4O43908 158 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
CBWD3-205ENST00000469687 UBA7P41226 1012 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 TCP11X2Q5H9J9 407 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 GALNT17Q6IS24 598 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
CBWD3-205ENST00000469687 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
CBWD3-205ENST00000469687 KCNJ18B7U540 433 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
CBWD3-205ENST00000469687 BBOX1O75936 387 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 PLCG2P16885 1265 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
CBWD3-205ENST00000469687 KCNJ12Q14500 433 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 IRF2BP1Q8IU81 584 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 FAM163AQ96GL9 167 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-205ENST00000469687 FEZ1Q99689 392 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 LZTS2Q9BRK4 669 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 CARD6Q9BX69 1037 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 LRRC10BA6NIK2 292 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
CBWD3-205ENST00000469687 TXNRD1Q16881 649 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
CBWD3-205ENST00000469687 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 TMEM260Q9NX78 707 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
CBWD3-205ENST00000469687 LRRC37AA6NMS7 1700 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 PLCG1P19174 1290 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 HOXA10P31260 410 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 CASQ1P31415 396 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 ADSSL1Q8N142 457 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 RRP36Q96EU6 259 aaKnown RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 GOLGA6L9A6NEM1 432 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 CCDC175P0C221 793 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 PDHBP11177 359 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 EEF2KMTQ96G04 330 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
CBWD3-205ENST00000469687 OGFRQ9NZT2 677 aa16.54■□□□□ 0.24
CBWD3-205ENST00000469687 ITIH6Q6UXX5 1313 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 OR52Z1P0C646 297 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 AKR1B1P15121 316 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 H2AFXP16104 143 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-205ENST00000469687 ZSCAN20P17040 1043 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-205ENST00000469687 NONOQ15233 471 aaKnown RBP eCLIP16.53■□□□□ 0.24
CBWD3-205ENST00000469687 CABP7Q86V35 215 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 CERS5Q8N5B7 392 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 TBCKQ8TEA7 893 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
CBWD3-205ENST00000469687 TADA3O75528 432 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 PRPHP41219 470 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 TECP42680 631 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 NOVP48745 357 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 ERVK-24P63145 666 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
CBWD3-205ENST00000469687 LAD1O00515 517 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 TRIM37O94972 964 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 ABL1P00519 1130 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 NEK8Q86SG6 692 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 CNGA4Q8IV77 575 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 ACRBPQ8NEB7 543 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 COA7Q96BR5 231 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
CBWD3-205ENST00000469687 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 RHOBTB3O94955 611 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 GNA11P29992 359 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 CLCN6P51797 869 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 UBXN1Q04323 297 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 GABPAQ06546 454 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 KCNB1Q14721 858 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 DPP8Q6V1X1 898 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms