RNA–Protein interactions for RNA: ENST00000469404.1

NCK1-204, Transcript of NCK adaptor protein 1, humanhuman

TSL 2 BASIC

Gene NCK1, Length 2,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-204ENST00000469404 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 PPP2R3BQ9Y5P8 575 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 ADAMTS3O15072 1205 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 EPB41L2O43491 1005 aaKnown RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 TBC1D12O60347 775 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 SORBS3O60504 671 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 MYCP01106 439 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 ALAS1P13196 640 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 SYT1P21579 422 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 MCM2P49736 904 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 NAPAP54920 295 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 IRX3P78415 501 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 NR5A1Q13285 461 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 TRIM29Q14134 588 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 SLC35G1Q2M3R5 365 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 NOM1Q5C9Z4 860 aaKnown RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 TMTC2Q8N394 836 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 SNX21Q969T3 373 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 ZNF274Q96GC6 653 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 C8orf76Q96K31 380 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 ZSCAN31Q96LW9 406 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 AGBL1Q96MI9 1066 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 FTOQ9C0B1 505 aaKnown RBP eCLIP5.16□□□□□ -1.58
NCK1-204ENST00000469404 VCPKMTQ9H867 229 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 AS3MTQ9HBK9 375 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 CWC22Q9HCG8 908 aaKnown RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 SH2B1Q9NRF2 756 aaPredicted RBP5.16□□□□□ -1.58
NCK1-204ENST00000469404 SZT2Q5T011 3432 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 ATAD5Q96QE3 1844 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 WDR90Q96KV7 1748 aa5.16□□□□□ -1.58
NCK1-204ENST00000469404 CCDC196A0A1B0GTZ2 297 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 TMEM88BA6NKF7 163 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 CFBP00751 764 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 ZNF543Q08ER8 600 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 CDC37Q16543 378 aaPredicted RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 UBE2SQ16763 222 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 TMTC3Q6ZXV5 915 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 TRMT1LQ7Z2T5 733 aaKnown RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 FCHSD1Q86WN1 690 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 ERO1BQ86YB8 467 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 CCAR1Q8IX12 1150 aaKnown RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 RRP36Q96EU6 259 aaKnown RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 PURBQ96QR8 312 aaKnown RBP5.15□□□□□ -1.58
NCK1-204ENST00000469404 R3HDMLQ9H3Y0 253 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 SH2D4AQ9H788 454 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 PRR12Q9ULL5 1215 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 TMX2Q9Y320 296 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 AFG3L2Q9Y4W6 797 aa5.15□□□□□ -1.58
NCK1-204ENST00000469404 IGKV6D-41A0A0C4DH26 115 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L15C9J2P7 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L13C9JLJ4 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L11C9JVI0 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L18D6R9N7 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L22D6RA61 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L17D6RBQ6 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L19D6RCP7 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L20D6RJB6 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 CDKL5O76039 1030 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 DDAH1O94760 285 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 NLRP5P59047 1200 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L24Q0WX57 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 QRICH1Q2TAL8 776 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 SYDE2Q5VT97 1194 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 JAKMIP3Q5VZ66 844 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 WWC2Q6AWC2 1192 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 TYW1BQ6NUM6 668 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 USP17L6PQ6QN14 398 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 NSMFQ6X4W1 530 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 FAM43AQ8N2R8 423 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 ANKRD13CQ8N6S4 541 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 OXER1Q8TDS5 423 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 JMJD4Q9H9V9 463 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 NYAP2Q9P242 653 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 BIN2Q9UBW5 565 aaPredicted RBP5.15□□□□□ -1.59
NCK1-204ENST00000469404 PCDHA1Q9Y5I3 950 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 OTOFQ9HC10 1997 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 CNTNAP5Q8WYK1 1306 aa5.15□□□□□ -1.59
NCK1-204ENST00000469404 MYH6P13533 1939 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 PDHXO00330 501 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 FIBPO43427 364 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 STX6O43752 255 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 PPP1R11O60927 126 aaPredicted RBP5.14□□□□□ -1.59
NCK1-204ENST00000469404 IGSF3O75054 1194 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 CALM1P0DP23 149 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 CALM2P0DP24 149 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 CALM3P0DP25 149 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 CALML3P27482 149 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 MMP14P50281 582 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 SNAPC2Q13487 334 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 GRM4Q14833 912 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 NTRK3Q16288 839 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 SNRNP48Q6IEG0 339 aaKnown RBP5.14□□□□□ -1.59
NCK1-204ENST00000469404 METTL16Q86W50 562 aaKnown RBP5.14□□□□□ -1.59
NCK1-204ENST00000469404 NCAPG2Q86XI2 1143 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 TBC1D5Q92609 795 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 P2RX7Q99572 595 aaKnown RBP5.14□□□□□ -1.59
NCK1-204ENST00000469404 SLF1Q9BQI6 1058 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 AGXT2Q9BYV1 514 aa5.14□□□□□ -1.59
NCK1-204ENST00000469404 TCP11L1Q9NUJ3 509 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms