RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 CTCFP49711 727 aaPredicted RBP26.6■■□□□ 1.85
SREBF1-208ENST00000469356 TMEM132BQ14DG7 1078 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 CDC37Q16543 378 aaPredicted RBP26.6■■□□□ 1.85
SREBF1-208ENST00000469356 TKFCQ3LXA3 575 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 CCDC174Q6PII3 467 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 SRBD1Q8N5C6 995 aaKnown RBP26.6■■□□□ 1.85
SREBF1-208ENST00000469356 SHCBP1Q8NEM2 672 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 ERO1AQ96HE7 468 aa26.6■■□□□ 1.85
SREBF1-208ENST00000469356 BAZ2BQ9UIF8 2168 aaKnown RBP26.6■■□□□ 1.85
SREBF1-208ENST00000469356 A0A0G2JMZ2 1700 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 ZBTB5O15062 677 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 ICAM1P05362 532 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 MAPK4P31152 587 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 SNRNP48Q6IEG0 339 aaKnown RBP26.59■■□□□ 1.85
SREBF1-208ENST00000469356 RIOX2Q8IUF8 465 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 TRIM22Q8IYM9 498 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 REPS2Q8NFH8 660 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 CPVLQ9H3G5 476 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 R3HDMLQ9H3Y0 253 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 MROH8Q9H579 483 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 RAVER2Q9HCJ3 691 aaKnown RBP26.59■■□□□ 1.85
SREBF1-208ENST00000469356 TXNRD2Q9NNW7 524 aa26.59■■□□□ 1.85
SREBF1-208ENST00000469356 ZNF214Q9UL59 606 aaPredicted RBP26.59■■□□□ 1.85
SREBF1-208ENST00000469356 PNMA6FA0A0J9YX94 578 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 CNMDO75829 334 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 IFNAR1P17181 557 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 ME3Q16798 604 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 FBXO11Q86XK2 927 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 HOMER1Q86YM7 354 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 CCDC82Q8N4S0 544 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 MTMR8Q96EF0 704 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 AMNQ9BXJ7 453 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 FAM217BQ9NTX9 383 aaPredicted RBP26.58■■□□□ 1.85
SREBF1-208ENST00000469356 FBXO40Q9UH90 709 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 CCPG1Q9ULG6 757 aa26.58■■□□□ 1.85
SREBF1-208ENST00000469356 QRICH1Q2TAL8 776 aa26.57■■□□□ 1.84
SREBF1-208ENST00000469356 Q3C1V9 767 aa26.57■■□□□ 1.84
SREBF1-208ENST00000469356 GTF3C6Q969F1 213 aa26.57■■□□□ 1.84
SREBF1-208ENST00000469356 PIGSQ96S52 555 aa26.57■■□□□ 1.84
SREBF1-208ENST00000469356 CYTH3O43739 400 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 SLC4A3P48751 1232 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 FCGRTP55899 365 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 SSRP1Q08945 709 aaKnown RBP26.56■■□□□ 1.84
SREBF1-208ENST00000469356 SCRN1Q12765 414 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 NBPF11Q86T75 865 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 NCAPG2Q86XI2 1143 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 CHST13Q8NET6 341 aa26.56■■□□□ 1.84
SREBF1-208ENST00000469356 MOV10L1Q9BXT6 1211 aaKnown RBP26.56■■□□□ 1.84
SREBF1-208ENST00000469356 RNF26Q9BY78 433 aaPredicted RBP26.56■■□□□ 1.84
SREBF1-208ENST00000469356 NCOA5Q9HCD5 579 aaKnown RBP26.56■■□□□ 1.84
SREBF1-208ENST00000469356 HOXD10P28358 340 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 SNAP25P60880 206 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 LACTBP83111 547 aaPredicted RBP26.55■■□□□ 1.84
SREBF1-208ENST00000469356 WDR78Q5VTH9 848 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 CMTR1Q8N1G2 835 aaKnown RBP26.55■■□□□ 1.84
SREBF1-208ENST00000469356 TSKSQ9UJT2 592 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 IVNS1ABPQ9Y6Y0 642 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 ABCB11O95342 1321 aa26.55■■□□□ 1.84
SREBF1-208ENST00000469356 hCG_1984214I3L0E3 225 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 FOXN1O15353 648 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 PRPF3O43395 683 aaKnown RBP26.54■■□□□ 1.84
SREBF1-208ENST00000469356 GNRH1P01148 92 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 ALAS1P13196 640 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 POTEEQ6S8J3 1075 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 ZNF713Q8N859 430 aaPredicted RBP26.54■■□□□ 1.84
SREBF1-208ENST00000469356 ZNF296Q8WUU4 475 aaPredicted RBP26.54■■□□□ 1.84
SREBF1-208ENST00000469356 COA7Q96BR5 231 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 MRPL11Q9Y3B7 192 aaKnown RBP26.54■■□□□ 1.84
SREBF1-208ENST00000469356 V9GY48 417 aaPredicted RBP26.54■■□□□ 1.84
SREBF1-208ENST00000469356 CNTNAP5Q8WYK1 1306 aa26.54■■□□□ 1.84
SREBF1-208ENST00000469356 STRNO43815 780 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 FMNL1O95466 1100 aaPredicted RBP26.53■■□□□ 1.84
SREBF1-208ENST00000469356 ERCC3P19447 782 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 NTRK3Q16288 839 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 PIBF1Q8WXW3 757 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 AGBL1Q96MI9 1066 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 MAF1Q9H063 256 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 ZNF536O15090 1300 aa26.53■■□□□ 1.84
SREBF1-208ENST00000469356 TNPO2O14787 897 aaKnown RBP26.52■■□□□ 1.84
SREBF1-208ENST00000469356 HSPA8P11142 646 aaKnown RBP26.52■■□□□ 1.84
SREBF1-208ENST00000469356 PSMC4P43686 418 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 FUT2Q10981 343 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 PLEKHH3Q7Z736 793 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 HSCBQ8IWL3 235 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 NECAB1Q8N987 351 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 SNX21Q969T3 373 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 TRERF1Q96PN7 1200 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 LLPHQ9BRT6 129 aaKnown RBP26.52■■□□□ 1.84
SREBF1-208ENST00000469356 SLC26A6Q9BXS9 759 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 ACAD9Q9H845 621 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 PCDHA1Q9Y5I3 950 aa26.52■■□□□ 1.84
SREBF1-208ENST00000469356 USH1GQ495M9 461 aa26.51■■□□□ 1.83
SREBF1-208ENST00000469356 WASF1Q92558 559 aa26.51■■□□□ 1.83
SREBF1-208ENST00000469356 EFCC1Q9HA90 598 aa26.51■■□□□ 1.83
SREBF1-208ENST00000469356 RNF146Q9NTX7 359 aa26.51■■□□□ 1.83
SREBF1-208ENST00000469356 MGAMO43451 1857 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 DEXIO95424 95 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 LARGE1O95461 756 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 FCER1AP12319 257 aa26.5■■□□□ 1.83
SREBF1-208ENST00000469356 KCTD2Q14681 263 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms