RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MYPNQ86TC9 1320 aa9.45□□□□□ -0.9
NPHP3-204ENST00000469232 ESYT2A0FGR8 921 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 SCG2P13521 617 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 GJA5P36382 358 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 ATP2B2Q01814 1243 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 PKP1Q13835 747 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
NPHP3-204ENST00000469232 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
NPHP3-204ENST00000469232 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 PROCA1Q8NCQ7 364 aaPredicted RBP9.44□□□□□ -0.9
NPHP3-204ENST00000469232 CHURC1Q8WUH1 139 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 DDX11Q96FC9 970 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 SLC26A6Q9BXS9 759 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.44□□□□□ -0.9
NPHP3-204ENST00000469232 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 WDR33Q9C0J8 1336 aaKnown RBP9.44□□□□□ -0.9
NPHP3-204ENST00000469232 MYH6P13533 1939 aa9.44□□□□□ -0.9
NPHP3-204ENST00000469232 PNMA6FA0A0J9YX94 578 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 IRF6O14896 467 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 TOMM70O94826 608 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
NPHP3-204ENST00000469232 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
NPHP3-204ENST00000469232 FDX1P10109 184 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 VCAM1P19320 739 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 HOXA7P31268 230 aaPredicted RBP9.43□□□□□ -0.9
NPHP3-204ENST00000469232 FSTL1Q12841 308 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 MTMR2Q13614 643 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 SYDE2Q5VT97 1194 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 KCTD1Q719H9 257 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 ADGRF4Q8IZF3 695 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 C2orf69Q8N8R5 385 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 RANBP17Q9H2T7 1088 aaKnown RBP9.43□□□□□ -0.9
NPHP3-204ENST00000469232 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
NPHP3-204ENST00000469232 BAZ2BQ9UIF8 2168 aaKnown RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 M0R2N6 131 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 STXBP3O00186 592 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ZBTB5O15062 677 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PPP1R11O60927 126 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 U2AF2P26368 475 aaKnown RBP eCLIP9.42□□□□□ -0.94e-6■■□□□ 13.2
NPHP3-204ENST00000469232 GHRHRQ02643 423 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 RESTQ13127 1097 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 FAM83BQ5T0W9 1011 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 LBX2Q6XYB7 198 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 CATSPERGQ6ZRH7 1159 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 DAGLBQ8NCG7 672 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 SMC1BQ8NDV3 1235 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 REPS2Q8NFH8 660 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ZNF526Q8TF50 670 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 AIFM3Q96NN9 605 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 FEZ1Q99689 392 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PHF20Q9BVI0 1012 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 GPCPD1Q9NPB8 672 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 FRMPD2Q68DX3 1309 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 TMEM232C9JQI7 657 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 DTNBO60941 627 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 MMP1P03956 469 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 STAT2P52630 851 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PRKG1Q13976 671 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 MFSD10Q14728 455 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 CCDC96Q2M329 555 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 KRT40Q6A162 431 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 WWC2Q6AWC2 1192 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PRPF38AQ8NAV1 312 aaKnown RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 OPTNQ96CV9 577 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 SLC10A4Q96EP9 437 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
NPHP3-204ENST00000469232 WNK4Q96J92 1243 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PIGSQ96S52 555 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 MAF1Q9H063 256 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 ZMYND12Q9H0C1 365 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 PPP1R9AQ9ULJ8 1098 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 SLC45A1Q9Y2W3 748 aa9.42□□□□□ -0.9
NPHP3-204ENST00000469232 TRIM75PA6NK02 468 aa9.41□□□□□ -0.9
NPHP3-204ENST00000469232 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
NPHP3-204ENST00000469232 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
NPHP3-204ENST00000469232 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms