RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 NDUFA8P51970 172 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 STAT2P52630 851 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 SNW1Q13573 536 aaKnown RBP21.67■■□□□ 1.06
SMC4-209ENST00000468653 MAP3K11Q16584 847 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 REXO1Q8N1G1 1221 aaKnown RBP21.67■■□□□ 1.06
SMC4-209ENST00000468653 GLIS2Q9BZE0 524 aaPredicted RBP21.67■■□□□ 1.06
SMC4-209ENST00000468653 TSPY26PQ9H489 355 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 PITPNM2Q9BZ72 1349 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 WNT7AO00755 349 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 INPP5BP32019 993 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 FMR1NBQ8N0W7 255 aaPredicted RBP21.66■■□□□ 1.06
SMC4-209ENST00000468653 GRPEL1Q9HAV7 217 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 FBXO2Q9UK22 296 aaPredicted RBP21.66■■□□□ 1.06
SMC4-209ENST00000468653 SRPRBQ9Y5M8 271 aaKnown RBP21.66■■□□□ 1.06
SMC4-209ENST00000468653 MORC2Q9Y6X9 1032 aaPredicted RBP21.66■■□□□ 1.06
SMC4-209ENST00000468653 PFKFB1P16118 471 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 MCM7P33993 719 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 NONOQ15233 471 aaKnown RBP eCLIP21.66■■□□□ 1.062e-8■■■■■ 98.1
SMC4-209ENST00000468653 INF2Q27J81 1249 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 SUPT20HL1Q3ZLR7 823 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 SHC4Q6S5L8 630 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 BIN2Q9UBW5 565 aaPredicted RBP21.66■■□□□ 1.06
SMC4-209ENST00000468653 PCDHA1Q9Y5I3 950 aa21.66■■□□□ 1.06
SMC4-209ENST00000468653 GRIN3BO60391 1043 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 JAKMIP3Q5VZ66 844 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 RESP18Q5W5W9 173 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 CHURC1Q8WUH1 139 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 DCPSQ96C86 337 aaKnown RBP21.65■■□□□ 1.06
SMC4-209ENST00000468653 WRNIP1Q96S55 665 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 RIC8AQ9NPQ8 531 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 ZNF112Q9UJU3 913 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 PRR12Q9ULL5 1215 aa21.65■■□□□ 1.06
SMC4-209ENST00000468653 MRPL12P52815 198 aaKnown RBP21.64■■□□□ 1.06
SMC4-209ENST00000468653 SNAP25P60880 206 aa21.64■■□□□ 1.06
SMC4-209ENST00000468653 PTGDRQ13258 359 aa21.64■■□□□ 1.06
SMC4-209ENST00000468653 CUL5Q93034 780 aa21.64■■□□□ 1.06
SMC4-209ENST00000468653 AMNQ9BXJ7 453 aa21.64■■□□□ 1.06
SMC4-209ENST00000468653 MRVI1Q9Y6F6 885 aa21.64■■□□□ 1.06
SMC4-209ENST00000468653 ATAD5Q96QE3 1844 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 CTAGE5O15320 804 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 FBXO11Q86XK2 927 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 CKAP2LQ8IYA6 745 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 SCYL3Q8IZE3 742 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 ZNF579Q8NAF0 562 aaKnown RBP21.64■■□□□ 1.05
SMC4-209ENST00000468653 FERMT2Q96AC1 680 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 PSTPIP2Q9H939 334 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 PICK1Q9NRD5 415 aa21.64■■□□□ 1.05
SMC4-209ENST00000468653 SYKP43405 635 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 ATP2C1P98194 919 aaPredicted RBP21.63■■□□□ 1.05
SMC4-209ENST00000468653 FAM160B2Q86V87 743 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 SULF1Q8IWU6 871 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 KIAA1683Q9H0B3 1180 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 GLT8D2Q9H1C3 349 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 TMEM260Q9NX78 707 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 FAM13BQ9NYF5 915 aa21.63■■□□□ 1.05
SMC4-209ENST00000468653 ZNF202O95125 648 aa21.62■■□□□ 1.05
SMC4-209ENST00000468653 GRIN1Q05586 938 aa21.62■■□□□ 1.05
SMC4-209ENST00000468653 L3MBTL3Q96JM7 780 aaPredicted RBP21.62■■□□□ 1.05
SMC4-209ENST00000468653 SDF4Q9BRK5 362 aa21.62■■□□□ 1.05
SMC4-209ENST00000468653 FEM1BQ9UK73 627 aa21.62■■□□□ 1.05
SMC4-209ENST00000468653 PLA2G6O60733 806 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 SPECC1Q5M775 1068 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 RBM43Q6ZSC3 357 aaKnown RBP21.61■■□□□ 1.05
SMC4-209ENST00000468653 ZKSCAN4Q969J2 545 aaPredicted RBP21.61■■□□□ 1.05
SMC4-209ENST00000468653 KIFC2Q96AC6 838 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 CSRNP2Q9H175 543 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 RBSNQ9H1K0 784 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 FZD1Q9UP38 647 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 HPSEQ9Y251 543 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 FAM237AA0A1B0GTK4 181 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 CCDC192P0DO97 292 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 UBE2SQ16763 222 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 USH1GQ495M9 461 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 NEK8Q86SG6 692 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 TBCKQ8TEA7 893 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 LPAR1Q92633 364 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 AS3MTQ9HBK9 375 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 KCNH3Q9ULD8 1083 aa21.61■■□□□ 1.05
SMC4-209ENST00000468653 ZC3H4Q9UPT8 1303 aaKnown RBP21.6■■□□□ 1.05
SMC4-209ENST00000468653 XRCC6P12956 609 aaKnown RBP eCLIP21.6■■□□□ 1.05
SMC4-209ENST00000468653 TRAF1Q13077 416 aa21.6■■□□□ 1.05
SMC4-209ENST00000468653 LETM2Q2VYF4 491 aa21.6■■□□□ 1.05
SMC4-209ENST00000468653 SAMD1Q6SPF0 538 aaPredicted RBP21.6■■□□□ 1.05
SMC4-209ENST00000468653 KLRG1Q96E93 195 aa21.6■■□□□ 1.05
SMC4-209ENST00000468653 WDR46O15213 610 aaKnown RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 EPHX2P34913 555 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 PRKG1Q13976 671 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 ARL6IP4Q66PJ3 421 aaKnown RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 USP50Q70EL3 339 aaPredicted RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 FUCA2Q9BTY2 467 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 POLR2AP24928 1970 aaKnown RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 UTRNP46939 3433 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 VWA3AA6NCI4 1184 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 GLTPD2A6NH11 291 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 CCNT1O60563 726 aaKnown RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 PTPRAP18433 802 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 CLK2P49760 499 aaKnown RBP21.59■■□□□ 1.05
SMC4-209ENST00000468653 USP14P54578 494 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 SPP2Q13103 211 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 MTMR2Q13614 643 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms