RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 NCOA5Q9HCD5 579 aaKnown RBP13.06□□□□□ -0.32
MSH5-214ENST00000468602 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 PRDM10Q9NQV6 1147 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 FBXO28Q9NVF7 368 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
MSH5-214ENST00000468602 RBPJLQ9UBG7 517 aa13.06□□□□□ -0.32
MSH5-214ENST00000468602 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
MSH5-214ENST00000468602 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
MSH5-214ENST00000468602 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 ZBED4O75132 1171 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 CNMDO75829 334 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 PFKFB3Q16875 520 aaPredicted RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 RIOX2Q8IUF8 465 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 WASF1Q92558 559 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
MSH5-214ENST00000468602 MYH6P13533 1939 aa13.05□□□□□ -0.32
MSH5-214ENST00000468602 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
MSH5-214ENST00000468602 AOC2O75106 756 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 SLC25A27O95847 323 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 SLC16A2P36021 539 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 RGS19P49795 217 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
MSH5-214ENST00000468602 CDC37Q16543 378 aaPredicted RBP13.04□□□□□ -0.32
MSH5-214ENST00000468602 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 PIGSQ96S52 555 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 TEX13BQ9BXU2 312 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
MSH5-214ENST00000468602 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 SCG2P13521 617 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
MSH5-214ENST00000468602 STK3Q13188 491 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 TAF1CQ15572 869 aaPredicted RBP13.03□□□□□ -0.32
MSH5-214ENST00000468602 GALNT17Q6IS24 598 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 CHST13Q8NET6 341 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 KIFC2Q96AC6 838 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 BTBD7Q9P203 1132 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
MSH5-214ENST00000468602 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
MSH5-214ENST00000468602 PIK3CDO00329 1044 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 RAD21O60216 631 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 PPP1R11O60927 126 aaPredicted RBP13.02□□□□□ -0.33
MSH5-214ENST00000468602 CYP2C8P10632 490 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 STAT3P40763 770 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ERVK-24P63145 666 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 FBXO11Q86XK2 927 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 RAB11FIP4Q86YS3 637 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ABRAQ8N0Z2 381 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.33
MSH5-214ENST00000468602 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 RNF186Q9NXI6 227 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
MSH5-214ENST00000468602 FBXO40Q9UH90 709 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ABCB11O95342 1321 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
MSH5-214ENST00000468602 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 CCNA1P78396 465 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 CRHR2Q13324 411 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 MCTP2Q6DN12 878 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 CMTR1Q8N1G2 835 aaKnown RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 PHKBQ93100 1093 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 MROH8Q9H579 483 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 NAP1L2Q9ULW6 460 aaPredicted RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
MSH5-214ENST00000468602 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
MSH5-214ENST00000468602 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
MSH5-214ENST00000468602 STXBP3O00186 592 aa13□□□□□ -0.33
MSH5-214ENST00000468602 STRNO43815 780 aa13□□□□□ -0.33
MSH5-214ENST00000468602 JAK2O60674 1132 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms