RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 ZNF609O15014 1411 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 CCDC196A0A1B0GTZ2 297 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 RIOK3O14730 519 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 VCAM1P19320 739 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 NOL9Q5SY16 702 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 EEPD1Q7L9B9 569 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 DHX37Q8IY37 1157 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 RAVER2Q9HCJ3 691 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 UBR2Q8IWV8 1755 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 NOP56O00567 594 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 POLR3GO15318 223 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 CFBP00751 764 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 INHAP05111 366 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 MYCLP12524 364 aaPredicted RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 PRKAR2AP13861 404 aaKnown RBP6.83□□□□□ -1.32
SHQ1-205ENST00000468371 GUCY1B3Q02153 619 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 KCTD1Q719H9 257 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 LUZP1Q86V48 1076 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 FCHSD1Q86WN1 690 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 MYRIPQ8NFW9 859 aa6.83□□□□□ -1.32
SHQ1-205ENST00000468371 B4E1Z4 1266 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 C6orf222P0C671 652 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 PCP11498 1178 aaKnown RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ERCC3P19447 782 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ZNF165P49910 485 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 CTR9Q6PD62 1173 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ATG4CQ96DT6 458 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 GLT1D1Q96MS3 346 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 TEPSINQ96N21 525 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 SCLT1Q96NL6 688 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ATP11BQ9Y2G3 1177 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 AFG3L2Q9Y4W6 797 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 A0A0G2JLL6 359 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 PES1O00541 588 aaKnown RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 CCL5P13501 91 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ANO6Q4KMQ2 910 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ZMYM1Q5SVZ6 1142 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 GPATCH4Q5T3I0 446 aaKnown RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ANO1Q5XXA6 986 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 PRRT2Q7Z6L0 340 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ZBED3Q96IU2 234 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 FAM227BQ96M60 508 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 TMX1Q9H3N1 280 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 BRMS1Q9HCU9 246 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 CACNA1SQ13698 1873 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 RPAP1Q9BWH6 1393 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ASB14A6NK59 587 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 DCDC2CA8MYV0 355 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 RRP36Q96EU6 259 aaKnown RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 SPATC1LQ9H0A9 340 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 ACAD9Q9H845 621 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 RNF146Q9NTX7 359 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 DACT1Q9NYF0 836 aa6.82□□□□□ -1.32
SHQ1-205ENST00000468371 FRMPD2Q68DX3 1309 aaPredicted RBP6.82□□□□□ -1.32
SHQ1-205ENST00000468371 SPDYE3A6NKU9 549 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 FGAP02671 866 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SYT1P21579 422 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 AK2P54819 239 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 TREML2Q5T2D2 321 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 ZFP91Q96JP5 570 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SENP6Q9GZR1 1112 aaPredicted RBP6.81□□□□□ -1.32
SHQ1-205ENST00000468371 F13A1P00488 732 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SP4Q02446 784 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 ARHGEF16Q5VV41 709 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 RETREG2Q8NC44 543 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 CEP95Q96GE4 821 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 KIF2CQ99661 725 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 NAT10Q9H0A0 1025 aaKnown RBP6.81□□□□□ -1.32
SHQ1-205ENST00000468371 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 NYAP2Q9P242 653 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 FAM184BQ9ULE4 1060 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SLC15A5A6NIM6 579 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 CHMLP26374 656 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SAFBQ15424 915 aaKnown RBP eCLIP6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SLFNL1Q499Z3 407 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 PNMA1Q8ND90 353 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 FERMT2Q96AC1 680 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 APBA2Q99767 749 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 SLC45A1Q9Y2W3 748 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 CEP290O15078 2479 aa6.81□□□□□ -1.32
SHQ1-205ENST00000468371 ADAMTS7Q9UKP4 1686 aa6.8□□□□□ -1.32
SHQ1-205ENST00000468371 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
SHQ1-205ENST00000468371 NDUFB10O96000 172 aa6.8□□□□□ -1.32
SHQ1-205ENST00000468371 CALM1P0DP23 149 aa6.8□□□□□ -1.32
SHQ1-205ENST00000468371 CALM2P0DP24 149 aa6.8□□□□□ -1.32
SHQ1-205ENST00000468371 CALM3P0DP25 149 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms