RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TRAPPC10P48553 1259 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 SNW1Q13573 536 aaKnown RBP23.54■■□□□ 1.36
TMEM53-207ENST00000468117 DCPSQ96C86 337 aaKnown RBP23.54■■□□□ 1.36
TMEM53-207ENST00000468117 NUP62CLQ9H1M0 184 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 GINM1Q9NU53 330 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 DDX19AQ9NUU7 478 aaKnown RBP23.54■■□□□ 1.36
TMEM53-207ENST00000468117 ADCY7P51828 1080 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 FAM160A1Q05DH4 1040 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 PPP1R18Q6NYC8 613 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 LRSAM1Q6UWE0 723 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 REXO1Q8N1G1 1221 aaKnown RBP23.53■■□□□ 1.36
TMEM53-207ENST00000468117 KRI1Q8N9T8 703 aaKnown RBP23.53■■□□□ 1.36
TMEM53-207ENST00000468117 ENGASEQ8NFI3 743 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 BIN2Q9UBW5 565 aaPredicted RBP23.53■■□□□ 1.36
TMEM53-207ENST00000468117 PRR12Q9ULL5 1215 aa23.53■■□□□ 1.36
TMEM53-207ENST00000468117 NDUFA8P51970 172 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 INF2Q27J81 1249 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 SUPT20HL1Q3ZLR7 823 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 SCYL3Q8IZE3 742 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 ADM5C9JUS6 153 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 CMA1P23946 247 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 PRKG1Q13976 671 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 SHC4Q6S5L8 630 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 FBXO2Q9UK22 296 aaPredicted RBP23.52■■□□□ 1.36
TMEM53-207ENST00000468117 PCDHA1Q9Y5I3 950 aa23.52■■□□□ 1.36
TMEM53-207ENST00000468117 PHIPQ8WWQ0 1821 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 GLTPD2A6NH11 291 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 CUTAO60888 179 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 GRIN1Q05586 938 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 JAKMIP3Q5VZ66 844 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 SULF1Q8IWU6 871 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 KLRG1Q96E93 195 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 TMEM260Q9NX78 707 aa23.51■■□□□ 1.35
TMEM53-207ENST00000468117 LETM1O95202 739 aaPredicted RBP23.5■■□□□ 1.35
TMEM53-207ENST00000468117 PTPREP23469 700 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 MCM7P33993 719 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 EPHX2P34913 555 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 DGKZQ13574 1117 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 KRT25Q7Z3Z0 450 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 FMR1NBQ8N0W7 255 aaPredicted RBP23.5■■□□□ 1.35
TMEM53-207ENST00000468117 TNMDQ9H2S6 317 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 CLSTN2Q9H4D0 955 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 RIC8AQ9NPQ8 531 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 SCN4AP35499 1836 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 ZC3H4Q9UPT8 1303 aaKnown RBP23.5■■□□□ 1.35
TMEM53-207ENST00000468117 PTGDRQ13258 359 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 KIAA1683Q9H0B3 1180 aa23.5■■□□□ 1.35
TMEM53-207ENST00000468117 PFKFB1P16118 471 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 NONOQ15233 471 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEM53-207ENST00000468117 SPECC1Q5M775 1068 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
TMEM53-207ENST00000468117 CUL5Q93034 780 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 KIFC2Q96AC6 838 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 AMNQ9BXJ7 453 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 PICK1Q9NRD5 415 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 SRPRBQ9Y5M8 271 aaKnown RBP23.49■■□□□ 1.35
TMEM53-207ENST00000468117 BMP15O95972 392 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 PTPRAP18433 802 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 MTMR2Q13614 643 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 UBE2SQ16763 222 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 USH1GQ495M9 461 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 RESP18Q5W5W9 173 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 KRT26Q7Z3Y9 468 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 FBXO11Q86XK2 927 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 CHURC1Q8WUH1 139 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 PSTPIP2Q9H939 334 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 FBXO28Q9NVF7 368 aa23.49■■□□□ 1.35
TMEM53-207ENST00000468117 KINO60870 393 aaKnown RBP23.48■■□□□ 1.35
TMEM53-207ENST00000468117 TAL1P17542 331 aaPredicted RBP23.48■■□□□ 1.35
TMEM53-207ENST00000468117 SPP2Q13103 211 aa23.48■■□□□ 1.35
TMEM53-207ENST00000468117 SAMD1Q6SPF0 538 aaPredicted RBP23.48■■□□□ 1.35
TMEM53-207ENST00000468117 MYH7BA7E2Y1 1941 aa23.48■■□□□ 1.35
TMEM53-207ENST00000468117 ATP2C1P98194 919 aaPredicted RBP23.47■■□□□ 1.35
TMEM53-207ENST00000468117 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
TMEM53-207ENST00000468117 CKAP2LQ8IYA6 745 aa23.47■■□□□ 1.35
TMEM53-207ENST00000468117 MORC2Q9Y6X9 1032 aaPredicted RBP23.47■■□□□ 1.35
TMEM53-207ENST00000468117 USP2O75604 605 aaPredicted RBP23.47■■□□□ 1.35
TMEM53-207ENST00000468117 MRPL12P52815 198 aaKnown RBP23.47■■□□□ 1.35
TMEM53-207ENST00000468117 TBCKQ8TEA7 893 aa23.47■■□□□ 1.35
TMEM53-207ENST00000468117 LPAR1Q92633 364 aa23.47■■□□□ 1.35
TMEM53-207ENST00000468117 FEM1BQ9UK73 627 aa23.47■■□□□ 1.35
TMEM53-207ENST00000468117 OTOFQ9HC10 1997 aa23.46■■□□□ 1.35
TMEM53-207ENST00000468117 PLA2G6O60733 806 aa23.46■■□□□ 1.35
TMEM53-207ENST00000468117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEM53-207ENST00000468117 ZHX2Q9Y6X8 837 aa23.46■■□□□ 1.35
TMEM53-207ENST00000468117 WDR46O15213 610 aaKnown RBP23.45■■□□□ 1.35
TMEM53-207ENST00000468117 CLK2P49760 499 aaKnown RBP23.45■■□□□ 1.35
TMEM53-207ENST00000468117 FAM160B2Q86V87 743 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 WDR18Q9BV38 432 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 CSRNP2Q9H175 543 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 GRPEL1Q9HAV7 217 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 EMILIN3Q9NT22 766 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 HPSEQ9Y251 543 aa23.45■■□□□ 1.35
TMEM53-207ENST00000468117 USP17L15C9J2P7 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L13C9JLJ4 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L11C9JVI0 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L18D6R9N7 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L22D6RA61 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L17D6RBQ6 530 aa23.45■■□□□ 1.34
TMEM53-207ENST00000468117 USP17L19D6RCP7 530 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms