RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TMEM39AQ9NV64 488 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
TRIM56-203ENST00000467847 STAT2P52630 851 aa20.5■□□□□ 0.87
TRIM56-203ENST00000467847 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
TRIM56-203ENST00000467847 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
TRIM56-203ENST00000467847 GMCL1Q96IK5 515 aa20.5■□□□□ 0.87
TRIM56-203ENST00000467847 FGD4Q96M96 766 aa20.5■□□□□ 0.87
TRIM56-203ENST00000467847 ABHD16BQ9H3Z7 469 aa20.5■□□□□ 0.87
TRIM56-203ENST00000467847 CDH23Q9H251 3354 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 MYADML2A6NDP7 307 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 DCDC2CA8MYV0 355 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 C6orf222P0C671 652 aaPredicted RBP20.49■□□□□ 0.87
TRIM56-203ENST00000467847 FDX1P10109 184 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 SLC1A4P43007 532 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 SMAD3P84022 425 aaKnown RBP20.49■□□□□ 0.87
TRIM56-203ENST00000467847 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 CCSAPQ6IQ19 270 aaPredicted RBP20.49■□□□□ 0.87
TRIM56-203ENST00000467847 ARMCX2Q7L311 632 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 ANKRD33Q7Z3H0 272 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 TOX2Q96NM4 488 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 SEMA6BQ9H3T3 888 aa20.49■□□□□ 0.87
TRIM56-203ENST00000467847 EYSQ5T1H1 3165 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 MCCP23508 829 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 CST5P28325 142 aaPredicted RBP20.48■□□□□ 0.87
TRIM56-203ENST00000467847 FPGSQ05932 587 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 FAAP100Q0VG06 881 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 CCDC129Q6ZRS4 1044 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 FAM160B2Q86V87 743 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 CHURC1Q8WUH1 139 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 MYLIPQ8WY64 445 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
TRIM56-203ENST00000467847 ACAD9Q9H845 621 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 SPC25Q9HBM1 224 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
TRIM56-203ENST00000467847 STX8Q9UNK0 236 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 VCANP13611 3396 aa20.48■□□□□ 0.87
TRIM56-203ENST00000467847 TSPY2A6NKD2 308 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 ADCY6O43306 1168 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 EPHB4P54760 987 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 CNTN2Q02246 1040 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 PCSK9Q8NBP7 692 aaKnown RBP20.47■□□□□ 0.87
TRIM56-203ENST00000467847 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 GLT1D1Q96MS3 346 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM56-203ENST00000467847 ELP1O95163 1332 aa20.47■□□□□ 0.87
TRIM56-203ENST00000467847 FOXP2O15409 715 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 ASGR1P07306 291 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 FOSL2P15408 326 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
TRIM56-203ENST00000467847 VTI1AQ96AJ9 217 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 UPF3AQ9H1J1 476 aaKnown RBP20.46■□□□□ 0.87
TRIM56-203ENST00000467847 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 ZNF536O15090 1300 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 MROH7Q68CQ1 1323 aa20.46■□□□□ 0.87
TRIM56-203ENST00000467847 NMT2O60551 498 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 GJA9P57773 515 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 TKFCQ3LXA3 575 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 GNASQ5JWF2 1037 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 KCTD1Q719H9 257 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 FAM133AQ8N9E0 248 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 A1CFQ9NQ94 594 aaKnown RBP20.45■□□□□ 0.86
TRIM56-203ENST00000467847 IL17RBQ9NRM6 502 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
TRIM56-203ENST00000467847 RANBP6O60518 1105 aaKnown RBP20.44■□□□□ 0.86
TRIM56-203ENST00000467847 PLA2G6O60733 806 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 TIMP1P01033 207 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 ALAS1P13196 640 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 RCSD1Q6JBY9 416 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 TRERF1Q96PN7 1200 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 KATNBL1Q9H079 304 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 TTYH1Q9H313 450 aaPredicted RBP20.44■□□□□ 0.86
TRIM56-203ENST00000467847 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
TRIM56-203ENST00000467847 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
TRIM56-203ENST00000467847 SNAP25P60880 206 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 TNFAIP2Q03169 654 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 VPS53Q5VIR6 699 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 NOL8Q76FK4 1167 aaKnown RBP20.43■□□□□ 0.86
TRIM56-203ENST00000467847 EVI5LQ96CN4 794 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 TBX21Q9UL17 535 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
TRIM56-203ENST00000467847 LRRC37A2A6NM11 1700 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 SOWAHBA6NEL2 793 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 ASB14A6NK59 587 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 CDK7P50613 346 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 RRP1P56182 461 aaKnown RBP20.42■□□□□ 0.86
TRIM56-203ENST00000467847 RASGRP2Q7LDG7 609 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 ANAPC4Q9UJX5 808 aa20.42■□□□□ 0.86
TRIM56-203ENST00000467847 PRUNE2Q8WUY3 3088 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.41■□□□□ 0.86
TRIM56-203ENST00000467847 ARVCFO00192 962 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 CTAGE5O15320 804 aa20.41■□□□□ 0.86
TRIM56-203ENST00000467847 BEX3Q00994 111 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms