RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
CCHCR1-211ENST00000467553 PHF24Q9UPV7 400 aa16.58■□□□□ 0.24
CCHCR1-211ENST00000467553 PGK2P07205 417 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 FAM109BQ6ICB4 259 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 CHURC1Q8WUH1 139 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 ISY1Q9ULR0 285 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 ATP11BQ9Y2G3 1177 aa16.57■□□□□ 0.24
CCHCR1-211ENST00000467553 RAD50Q92878 1312 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 PLA2G6O60733 806 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 BMP3P12645 472 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 ADCYAP1R1P41586 468 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 FAM160B2Q86V87 743 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 DEFB123Q8N688 67 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 STAG1Q8WVM7 1258 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
CCHCR1-211ENST00000467553 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 MCCP23508 829 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 PTH1RQ03431 593 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 LAMA2P24043 3122 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-211ENST00000467553 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 SGSM2O43147 1006 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 STAT2P52630 851 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 TKFCQ3LXA3 575 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 ESR2Q92731 530 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 STXBP5LQ9Y2K9 1186 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 RIPK3Q9Y572 518 aa16.54■□□□□ 0.24
CCHCR1-211ENST00000467553 NEDD4P46934 1319 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 B4E1Z4 1266 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 CPXCR1Q8N123 301 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 MTMR10Q9NXD2 777 aa16.53■□□□□ 0.24
CCHCR1-211ENST00000467553 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 KDM4AO75164 1064 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 ADAMTS4O75173 837 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 CST5P28325 142 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 SLC1A4P43007 532 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 KLHDC9Q8NEP7 349 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-211ENST00000467553 MROH7Q68CQ1 1323 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 A0A1W2PQ45 241 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 A0A1W2PQY0 241 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 PGK1P00558 417 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 CLTBP09497 229 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 NOVP48745 357 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 ANKRD33Q7Z3H0 272 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 TTC14Q96N46 770 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 KRT23Q9C075 422 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 ACAD9Q9H845 621 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 PRDM5Q9NQX1 630 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
CCHCR1-211ENST00000467553 ELP1O95163 1332 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 LAMA4Q16363 1823 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 KIAA0355O15063 1070 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 NT5C2P49902 561 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 TLE2Q04725 743 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms