RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	REXO1	Q8N1G1	1221 aa	Known RBP	14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	GGA3	Q9NZ52	723 aa		14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	HPSE	Q9Y251	543 aa		14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	SRPRB	Q9Y5M8	271 aa	Known RBP	14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	MRVI1	Q9Y6F6	885 aa		14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	PARP14	Q460N5	1801 aa		14.05	□□□□□ -0.16
HDLBP-231	ENST00000467435	MYH7B	A7E2Y1	1941 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	FAM237A	A0A1B0GTK4	181 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	TMEM232	C9JQI7	657 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	CCDC192	P0DO97	292 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	LMOD1	P29536	600 aa	Predicted RBP	14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	EPS15	P42566	896 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	ATP2C1	P98194	919 aa	Predicted RBP	14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	NONO	Q15233	471 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	INF2	Q27J81	1249 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	DCAF15	Q66K64	600 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	BTNL9	Q6UXG8	535 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	SPICE1	Q8N0Z3	855 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	ZNF579	Q8NAF0	562 aa	Known RBP	14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	FERMT2	Q96AC1	680 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	HOOK2	Q96ED9	719 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	ZNF341	Q9BYN7	854 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	VCPKMT	Q9H867	229 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	GINM1	Q9NU53	330 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	FAM13B	Q9NYF5	915 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	SSC5D	A1L4H1	1573 aa		14.04	□□□□□ -0.16
HDLBP-231	ENST00000467435	DDN	O94850	711 aa	Predicted RBP	14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	ZNF202	O95125	648 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	MCM7	P33993	719 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	SYK	P43405	635 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	GRIN1	Q05586	938 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	TYRO3	Q06418	890 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	ZYX	Q15942	572 aa	Known RBP	14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	KIAA1755	Q5JYT7	1200 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	FAM83B	Q5T0W9	1011 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	NBPF12	Q5TAG4	269 aa	Predicted RBP	14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	C9orf131	Q5VYM1	1079 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	CCDC84	Q86UT8	332 aa	Predicted RBP	14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	RNF214	Q8ND24	703 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	CUL5	Q93034	780 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	FEZ1	Q99689	392 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	PANK2	Q9BZ23	570 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	GLIS2	Q9BZE0	524 aa	Predicted RBP	14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	RIC8A	Q9NPQ8	531 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	TMEM260	Q9NX78	707 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	PPP2R3B	Q9Y5P8	575 aa		14.03	□□□□□ -0.16
HDLBP-231	ENST00000467435	PITPNM2	Q9BZ72	1349 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	CTNND1	O60716	968 aa	Known RBP	14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	STAT2	P52630	851 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	PTGDR	Q13258	359 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	SPECC1	Q5M775	1068 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	JAKMIP3	Q5VZ66	844 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	SASS6	Q6UVJ0	657 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	TIGD1	Q96MW7	591 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	CSRNP2	Q9H175	543 aa		14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	ADARB2	Q9NS39	739 aa	Known RBP	14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	BIN2	Q9UBW5	565 aa	Predicted RBP	14.02	□□□□□ -0.17
HDLBP-231	ENST00000467435	SCN4A	P35499	1836 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	GOLGB1	Q14789	3259 aa	Known RBP	14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	HIRA	P54198	1017 aa	Predicted RBP	14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	SNAP25	P60880	206 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	UBE2S	Q16763	222 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	NEK8	Q86SG6	692 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	SDF4	Q9BRK5	362 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	AMN	Q9BXJ7	453 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	KCNH3	Q9ULD8	1083 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	PRR12	Q9ULL5	1215 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	PCDHA1	Q9Y5I3	950 aa		14.01	□□□□□ -0.17
HDLBP-231	ENST00000467435	VWA3A	A6NCI4	1184 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	INPP5B	P32019	993 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	MRPL12	P52815	198 aa	Known RBP	14	□□□□□ -0.17
HDLBP-231	ENST00000467435	FAM160B2	Q86V87	743 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	FBXO11	Q86XK2	927 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	SCYL3	Q8IZE3	742 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	TBCK	Q8TEA7	893 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	GLT8D2	Q9H1C3	349 aa		14	□□□□□ -0.17
HDLBP-231	ENST00000467435	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	CLK2	P49760	499 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	ORC2	Q13416	577 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	STX1A	Q16623	288 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	LETM2	Q2VYF4	491 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	USH1G	Q495M9	461 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	PRAMEF18	Q5VWM3	479 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	C4orf32	Q8N8J7	132 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	CHURC1	Q8WUH1	139 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	SYMPK	Q92797	1274 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	WRNIP1	Q96S55	665 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	PSTPIP2	Q9H939	334 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	ZNF112	Q9UJU3	913 aa		13.99	□□□□□ -0.17
HDLBP-231	ENST00000467435	PTPRF	P10586	1907 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	LAD1	O00515	517 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	WDR46	O15213	610 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	NEMF	O60524	1076 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	CCNT1	O60563	726 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	PLA2G6	O60733	806 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	ANO6	Q4KMQ2	910 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	KRBA2	Q6ZNG9	492 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	CNNM3	Q8NE01	707 aa		13.98	□□□□□ -0.17
HDLBP-231	ENST00000467435	LPAR1	Q92633	364 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms