RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 TNKSO95271 1327 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 NUP98P52948 1817 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 EXOC1Q9NV70 894 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 SLC4A4Q9Y6R1 1079 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 GIMAP8Q8ND71 665 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 SECISBP2LQ93073 1101 aaKnown RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 NHEJ1Q9H9Q4 299 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 ENC1O14682 589 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 PSMA7O14818 248 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 KIF5AQ12840 1032 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 CD302Q8IX05 232 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 ZSCAN10Q96SZ4 725 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-205ENST00000467213 ABCB11O95342 1321 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
CHD1L-205ENST00000467213 MYBL2P10244 700 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 DDR1Q08345 913 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 MREGQ8N565 214 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 C4orf32Q8N8J7 132 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 PRPF38AQ8NAV1 312 aaKnown RBP17.39■□□□□ 0.37
CHD1L-205ENST00000467213 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
CHD1L-205ENST00000467213 BICDL2A1A5D9 508 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 PDE2AO00408 941 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 TACC1O75410 805 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 FSBPO95073 299 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 TROAPQ12815 778 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 ZNF174Q15697 407 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 NUP133Q8WUM0 1156 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 IDEP14735 1019 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 ENAHQ8N8S7 591 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-205ENST00000467213 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 CNTNAP5Q8WYK1 1306 aa17.38■□□□□ 0.37
CHD1L-205ENST00000467213 LAMB2P55268 1798 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 LAD1O00515 517 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 PJA2O43164 708 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 CALML3P27482 149 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 CCT5P48643 541 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
CHD1L-205ENST00000467213 BCAS4Q8TDM0 211 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 BLZF1Q9H2G9 400 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 DISC1Q9NRI5 854 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 KBTBD4Q9NVX7 518 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 MYH1P12882 1939 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 KLRC4O43908 158 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 IL17AQ16552 155 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 LACRTQ9GZZ8 138 aa17.37■□□□□ 0.37
CHD1L-205ENST00000467213 LAMB1P07942 1786 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 WNT7AO00755 349 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-205ENST00000467213 SRGAP2O75044 1071 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 PLCB4Q15147 1175 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
CHD1L-205ENST00000467213 FOXR2Q6PJQ5 311 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 MICALCLQ6ZW33 695 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 ZKSCAN3Q9BRR0 538 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 PLAGL2Q9UPG8 496 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 RASSF10A6NK89 507 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 ERVV-1B6SEH8 477 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-205ENST00000467213 KDM7AQ6ZMT4 941 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 C3orf20Q8ND61 904 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 SPATA4Q8NEY3 305 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 RIN2Q8WYP3 895 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-205ENST00000467213 EDEM3Q9BZQ6 932 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 STIM2Q9P246 746 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 HYOU1Q9Y4L1 999 aa17.36■□□□□ 0.37
CHD1L-205ENST00000467213 V9GY48 417 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-205ENST00000467213 RCCD1A6NED2 376 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 INPP5BP32019 993 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 TUBGCP2Q9BSJ2 902 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 PRKAB2O43741 272 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 HSF2BPO75031 334 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 STARD3NLO95772 234 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 CCNE1P24864 410 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 PRPHP41219 470 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 STAT6P42226 847 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 GNGT1P63211 74 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 DRP2Q13474 957 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 SPA17Q15506 151 aa17.35■□□□□ 0.37
CHD1L-205ENST00000467213 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms