RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 FPGT-TNNI3KV9GXZ4 949 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 MAGEB6P1A0A0J9YX57 407 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 CXCL10P02778 98 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 RRP1BQ14684 758 aaKnown RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 KCNV1Q6PIU1 500 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 FAM178BQ8IXR5 827 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 RAD9AQ99638 391 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 SLC3A2P08195 630 aaKnown RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ITGB8P26012 769 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 TFCP2Q12800 502 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ITGA7Q13683 1181 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 POTEEQ6S8J3 1075 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ADHFE1Q8IWW8 467 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ZNF384Q8TF68 577 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ACAD9Q9H845 621 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 AATFQ9NY61 560 aaKnown RBP eCLIP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ZNF214Q9UL59 606 aaPredicted RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ANP32CO43423 234 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 ASGR1P07306 291 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 PCP11498 1178 aaKnown RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 SLFN5Q08AF3 891 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 UBE3CQ15386 1083 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 HERC6Q8IVU3 1022 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 MAPKAPK5Q8IW41 473 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 GJD3Q8N144 294 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 DNERQ8NFT8 737 aa6.85□□□□□ -1.31
CXXC4-202ENST00000466963 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 GNEQ9Y223 722 aaKnown RBP6.85□□□□□ -1.31
CXXC4-202ENST00000466963 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 RAB11FIP3O75154 756 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 ADORA1P30542 326 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 GUCY1A2P33402 732 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 EPHB4P54760 987 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 FSCN1Q16658 493 aaKnown RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 CCDC178Q5BJE1 867 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 NEK9Q8TD19 979 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 PABPC5Q96DU9 382 aaKnown RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 GMCL1Q96IK5 515 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 FAM161BQ96MY7 647 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 UBE2ZQ9H832 354 aaPredicted RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 ZFYP08048 801 aaPredicted RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 ATP8B2P98198 1209 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 RAB3GAP1Q15042 981 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 C16orf59Q7L2K0 433 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 FAM133AQ8N9E0 248 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 MRPL38Q96DV4 380 aaKnown RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 AGBL1Q96MI9 1066 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 NEUROD6Q96NK8 337 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 RIOK1Q9BRS2 568 aaKnown RBP6.84□□□□□ -1.31
CXXC4-202ENST00000466963 SLC38A10Q9HBR0 1119 aa6.84□□□□□ -1.31
CXXC4-202ENST00000466963 GDF11O95390 407 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 SNAI1O95863 264 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 IGFBP4P22692 258 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 NHLH1Q02575 133 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 TMEM132BQ14DG7 1078 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 DUSP28Q4G0W2 176 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 SSH1Q8WYL5 1049 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 EMID1Q96A84 441 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 CDCA3Q99618 268 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 GBF1Q92538 1859 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 SRGAP2BP0DMP2 458 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 ATF7P17544 494 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 ZNF710Q8N1W2 664 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 KATNBL1Q9H079 304 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 CCDC8Q9H0W5 538 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 GPHNQ9NQX3 736 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 PALD1Q9ULE6 856 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 INSL6Q9Y581 213 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 WDR19Q8NEZ3 1342 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 CSF2RAP15509 400 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 FBXO22Q8NEZ5 403 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 CLUAP1Q96AJ1 413 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 ALDH8A1Q9H2A2 487 aaPredicted RBP6.83□□□□□ -1.32
CXXC4-202ENST00000466963 STK39Q9UEW8 545 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 SQORQ9Y6N5 450 aa6.83□□□□□ -1.32
CXXC4-202ENST00000466963 C5orf67F2Z3F1 127 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 AMHP03971 560 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 C6orf222P0C671 652 aaPredicted RBP6.82□□□□□ -1.32
CXXC4-202ENST00000466963 TIMM10P62072 90 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 TAP1Q03518 808 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 CBX2Q14781 532 aaPredicted RBP6.82□□□□□ -1.32
CXXC4-202ENST00000466963 C12orf60Q5U649 245 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 ARMCX2Q7L311 632 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 GPR161Q8N6U8 529 aaKnown RBP6.82□□□□□ -1.32
CXXC4-202ENST00000466963 ATG4CQ96DT6 458 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 YBX2Q9Y2T7 364 aaKnown RBP6.82□□□□□ -1.32
CXXC4-202ENST00000466963 HMMRO75330 724 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 PTK7Q13308 1070 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 SEPT2Q15019 361 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 STAG1Q8WVM7 1258 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms