RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 IFT140Q96RY7 1462 aa7.04□□□□□ -1.28
LRCH3-212ENST00000466845 DNMBPQ6XZF7 1577 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 TOPBP1Q92547 1522 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 RAG1P15918 1043 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 PCGF5Q86SE9 256 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 CREG2Q8IUH2 290 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 CCAR1Q8IX12 1150 aaKnown RBP7.03□□□□□ -1.28
LRCH3-212ENST00000466845 NLGN1Q8N2Q7 840 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 BAHD1Q8TBE0 780 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-212ENST00000466845 FAM84AQ96KN4 292 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 RPS6KC1Q96S38 1066 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
LRCH3-212ENST00000466845 DUSP13Q9UII6 198 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 TMEM59LQ9UK28 342 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 TBX22Q9Y458 520 aa7.03□□□□□ -1.28
LRCH3-212ENST00000466845 TLR3O15455 904 aaKnown RBP7.02□□□□□ -1.29
LRCH3-212ENST00000466845 IMPDH2P12268 514 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 VAMP1P23763 118 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF76P36508 570 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 TBX4P57082 545 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 APOBRQ0VD83 1088 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 BIRC2Q13490 618 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 PKN1Q16512 942 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 PLEKHG6Q3KR16 790 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 TTC6Q86TZ1 520 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 SLITRK4Q8IW52 837 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 FBXO27Q8NI29 283 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 VWCEQ96DN2 955 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 KIF2CQ99661 725 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 INO80BQ9C086 356 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-212ENST00000466845 BRINP2Q9C0B6 783 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 SLAMF8Q9P0V8 285 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 SYNPO2Q9UMS6 1093 aa7.02□□□□□ -1.29
LRCH3-212ENST00000466845 BTBD11A6QL63 1104 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 C8AP07357 584 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 LMOD3Q0VAK6 560 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 RGL3Q3MIN7 710 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 SPPL2CQ8IUH8 684 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 KSR1Q8IVT5 923 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 OXR1Q8N573 874 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF513Q8N8E2 541 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-212ENST00000466845 NKD1Q969G9 470 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
LRCH3-212ENST00000466845 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-212ENST00000466845 LRRC10BA6NIK2 292 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 VDRP11473 427 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 NEXNQ0ZGT2 675 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 ARSHQ5FYA8 562 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 KIAA0825Q8IV33 1275 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7□□□□□ -1.29
LRCH3-212ENST00000466845 LILRA2Q8N149 483 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 C1orf131Q8NDD1 294 aaKnown RBP7□□□□□ -1.29
LRCH3-212ENST00000466845 PDZD8Q8NEN9 1154 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 ABHD4Q8TB40 342 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 SPON2Q9BUD6 331 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
LRCH3-212ENST00000466845 PUF60Q9UHX1 559 aaKnown RBP7□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF503-AS2A6NEH8 195 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 MEIS3P2A8K0S8 358 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 RECKO95980 971 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 HPXP02790 462 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 IBSPP21815 317 aaPredicted RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 LTKP29376 864 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 CHRNEQ04844 493 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 EGR3Q06889 387 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 DUSP4Q13115 394 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 TCEAL1Q15170 157 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 NR0B2Q15466 257 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 ZRSR2Q15696 482 aaKnown RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 SEZ6Q53EL9 994 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 KRTAP1-3Q8IUG1 177 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 DAGLBQ8NCG7 672 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 SYTL5Q8TDW5 730 aaPredicted RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 MYLIPQ8WY64 445 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 PPP1R16BQ96T49 567 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 PAGR1Q9BTK6 254 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 BACH2Q9BYV9 841 aa6.99□□□□□ -1.29
LRCH3-212ENST00000466845 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 EIF4G3O43432 1585 aaKnown RBP6.99□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF608Q9ULD9 1512 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-212ENST00000466845 DNAJA2O60884 412 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 MCM4P33991 863 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 TDO2P48775 406 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
LRCH3-212ENST00000466845 SNX17Q15036 470 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 CCDC144BQ3MJ40 725 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 MPZL3Q6UWV2 235 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 RNF111Q6ZNA4 994 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 NLRC3Q7RTR2 1065 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 ZNF655Q8N720 491 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-212ENST00000466845 RNF34Q969K3 372 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 ATG4CQ96DT6 458 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 DHRS1Q96LJ7 313 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 UBP1Q9NZI7 540 aa6.98□□□□□ -1.29
LRCH3-212ENST00000466845 G3BP2Q9UN86 482 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms