RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TBX1O43435 398 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 DLX3O60479 287 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 EFCAB14O75071 495 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 VAMP4O75379 141 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 CEACAM5P06731 702 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 SNRPB2P08579 225 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 ENDOUP21128 410 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 MASP1P48740 699 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 GABREP78334 506 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 TRIM61Q5EBN2 209 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 NKAPLQ5M9Q1 402 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 FILIP1Q7Z7B0 1213 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 SPACA3Q8IXA5 215 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 TCTN2Q96GX1 697 aa6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 INTS7Q9NVH2 962 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-211ENST00000466538 AURKAO14965 403 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 CYP26A1O43174 497 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 VAV1P15498 845 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 CTSKP43235 329 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 KCNJ6P48051 423 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 DOC2BQ14184 412 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 IFI16Q16666 785 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 CDKAL1Q5VV42 579 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 TMPRSS7Q7RTY8 843 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 USHBP1Q8N6Y0 703 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 COPS5Q92905 334 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 PTPRN2Q92932 1015 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 MFSD3Q96ES6 412 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 HSPA12BQ96MM6 686 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 PIM2Q9P1W9 311 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 PLAGL2Q9UPG8 496 aa6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 GPR55Q9Y2T6 319 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-211ENST00000466538 C2orf71A6NGG8 1288 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 RAPGEF3O95398 923 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 VIL1P09327 827 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 FOSL1P15407 271 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 PCBP3P57721 371 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 TESK1Q15569 626 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 TM4SF20Q53R12 229 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 ACBD5Q5T8D3 534 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 IQCEQ6IPM2 695 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 RSPO2Q6UXX9 243 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 RNF111Q6ZNA4 994 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 MAMDC2Q7Z304 686 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 KRT26Q7Z3Y9 468 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 ZDHHC13Q8IUH4 622 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 TMEM145Q8NBT3 493 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 FCRL3Q96P31 734 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 MINPP1Q9UNW1 487 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
CDC42BPA-211ENST00000466538 TRBV23OR9-2A0A075B6M9 112 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 SSU72P8A0A1W2PR75 194 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 MEIS1O00470 390 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 MSTNO14793 375 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 ZNF205O95201 554 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 APPP05067 770 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 C6orf222P0C671 652 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 NAT1P18440 290 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 IGBP1P78318 339 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 RBM10P98175 930 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 SCRN1Q12765 414 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 CBX2Q14781 532 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 SF1Q15637 639 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 RSPO4Q2I0M5 234 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 DPY19L1Q2PZI1 675 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 EEF1DP3Q658K8 133 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 RCSD1Q6JBY9 416 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 FAM181AQ8N9Y4 354 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 KREMEN2Q8NCW0 462 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 DCAF4Q8WV16 495 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 SLC12A9Q9BXP2 914 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 LRRC4CQ9HCJ2 640 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 SEMA3GQ9NS98 782 aa6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-211ENST00000466538 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 AQP7O14520 342 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 IGHA1P01876 353 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 CD3EP07766 207 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 ECI1P42126 302 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 SEPHS1P49903 392 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 CYP4F3Q08477 520 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 E4F1Q66K89 784 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 CRTC3Q6UUV7 619 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 GSTCDQ8NEC7 633 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 ZFYVE21Q9BQ24 234 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 MCMBPQ9BTE3 642 aa6.21□□□□□ -1.42
CDC42BPA-211ENST00000466538 DUSP13Q9UII6 198 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms