RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 ADGRA1Q86SQ6 560 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 CCAR1Q8IX12 1150 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TRPV1Q8NER1 839 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 VTI1AQ96AJ9 217 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TMOD4Q9NZQ9 345 aa8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 DDX20Q9UHI6 824 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 GNEQ9Y223 722 aaKnown RBP8.51□□□□□ -1.05
RPUSD3-212ENST00000466141 TRIM43BA6NCK2 446 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 DNM1LO00429 736 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 CNMDO75829 334 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 GDF11O95390 407 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 ITGB8P26012 769 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 HOXA7P31268 230 aaPredicted RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 CYP2C19P33261 490 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 EPHB4P54760 987 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 BACE1P56817 501 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 GSTO1P78417 241 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 MAP2K5Q13163 448 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 NAA16Q6N069 864 aaPredicted RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 OTUD7AQ8TE49 926 aaPredicted RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 PPM1EQ8WY54 764 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 TRIM43Q96BQ3 446 aaPredicted RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 EDC3Q96F86 508 aaKnown RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 HAUS7Q99871 368 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 WDR18Q9BV38 432 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 TRIM34Q9BYJ4 488 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 MAF1Q9H063 256 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 IRF2BPLQ9H1B7 796 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 DNAJC18Q9H819 358 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 AS3MTQ9HBK9 375 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 PDLIM7Q9NR12 457 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 ECHDC1Q9NTX5 307 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 RLFQ13129 1914 aa8.5□□□□□ -1.05
RPUSD3-212ENST00000466141 hCG_2014768A0A024R1R8 64 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 PAX3P23760 479 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 ZYXQ15942 572 aaKnown RBP8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 TSHZ3Q63HK5 1081 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 SLC39A5Q6ZMH5 540 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 AMOTL1Q8IY63 956 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 PI4K2BQ8TCG2 481 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 LPAR1Q92633 364 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 RNPC3Q96LT9 517 aaKnown RBP8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 TBC1D2Q9BYX2 928 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 EMILIN3Q9NT22 766 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 DONSONQ9NYP3 566 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 TTC41PQ6P2S7 1318 aa8.49□□□□□ -1.05
RPUSD3-212ENST00000466141 GREB1LQ9C091 1923 aaPredicted RBP8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 CCDC194A0A1B0GVG4 234 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 TCRBV5S4A2TA0A5A2 114 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 KLHL33A6NCF5 533 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 IGHDP01880 384 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 LDHCP07864 332 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 PDE6AP16499 860 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 TDO2P48775 406 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 PPP4CP60510 307 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 TTF1Q15361 905 aaPredicted RBP8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 TEX11Q8IYF3 940 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 SH3RF3Q8TEJ3 882 aaPredicted RBP8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 PAG1Q9NWQ8 432 aa8.48□□□□□ -1.05
RPUSD3-212ENST00000466141 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 SLC15A5A6NIM6 579 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 ESPNB1AK53 854 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 C19orf81C9J6K1 198 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 USP17L10C9JJH3 530 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 KBTBD13C9JR72 458 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 SMAPO00193 183 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 ASNSP08243 561 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 CYBAP13498 195 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 PLCG2P16885 1265 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 MX1P20591 662 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 RFX1P22670 979 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 CYP7A1P22680 504 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 PTPREP23469 700 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 DNAJB2P25686 324 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 ADCYAP1R1P41586 468 aa8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
RPUSD3-212ENST00000466141 TLE2Q04725 743 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms