RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ERVFRD-1P60508 538 aa9.25□□□□□ -0.93
SSB-207ENST00000465871 NOL9Q5SY16 702 aaKnown RBP9.25□□□□□ -0.93
SSB-207ENST00000465871 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
SSB-207ENST00000465871 SLC12A9Q9BXP2 914 aa9.25□□□□□ -0.93
SSB-207ENST00000465871 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
SSB-207ENST00000465871 FAM86C1Q9NVL1 165 aa9.25□□□□□ -0.93
SSB-207ENST00000465871 NUAK1O60285 661 aa9.24□□□□□ -0.93
SSB-207ENST00000465871 CD247P20963 164 aa9.24□□□□□ -0.93
SSB-207ENST00000465871 HDLBPQ00341 1268 aaKnown RBP9.24□□□□□ -0.93
SSB-207ENST00000465871 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
SSB-207ENST00000465871 NT5DC4Q86YG4 428 aa9.24□□□□□ -0.93
SSB-207ENST00000465871 SRRTQ9BXP5 876 aaKnown RBP9.24□□□□□ -0.93
SSB-207ENST00000465871 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
SSB-207ENST00000465871 ITGA4P13612 1032 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 ARL4AP40617 200 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 EIF6P56537 245 aaKnown RBP9.23□□□□□ -0.93
SSB-207ENST00000465871 LAPTM5Q13571 262 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 KIR3DS1Q14943 382 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 FIBCD1Q8N539 461 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 NAT16Q8N8M0 369 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 BRF1Q92994 677 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 SGPP1Q9BX95 441 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 MBD1Q9UIS9 605 aaPredicted RBP9.23□□□□□ -0.93
SSB-207ENST00000465871 ACSL6Q9UKU0 697 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
SSB-207ENST00000465871 ZNF451Q9Y4E5 1061 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 LTBP3Q9NS15 1303 aa9.23□□□□□ -0.93
SSB-207ENST00000465871 GSTM1P09488 218 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 PRKCAP17252 672 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 SDHBP21912 280 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 GJA8P48165 433 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 GIPRP48546 466 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 YBX1P67809 324 aaKnown RBP9.22□□□□□ -0.93
SSB-207ENST00000465871 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
SSB-207ENST00000465871 OLFML2BQ68BL8 750 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 C19orf47Q8N9M1 422 aaKnown RBP9.22□□□□□ -0.93
SSB-207ENST00000465871 TMEM52Q8NDY8 209 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 OR6P1Q8NGX9 317 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 JMJD8Q96S16 334 aa9.22□□□□□ -0.93
SSB-207ENST00000465871 SF3B6Q9Y3B4 125 aaKnown RBP9.22□□□□□ -0.93
SSB-207ENST00000465871 ABLIM1O14639 778 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 CBFA2T2O43439 604 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 MPOP05164 745 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 LCE4AQ5TA78 99 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 CYP2R1Q6VVX0 501 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 NUP43Q8NFH3 380 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 PHAXQ9H814 394 aaKnown RBP9.21□□□□□ -0.94
SSB-207ENST00000465871 SIRT5Q9NXA8 310 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 KIAA1522Q9P206 1035 aaPredicted RBP9.21□□□□□ -0.94
SSB-207ENST00000465871 IMPACTQ9P2X3 320 aa9.21□□□□□ -0.94
SSB-207ENST00000465871 CNOT6Q9ULM6 557 aaKnown RBP9.21□□□□□ -0.94
SSB-207ENST00000465871 VIPR1P32241 457 aa9.2□□□□□ -0.94
SSB-207ENST00000465871 CYP4F8P98187 520 aa9.2□□□□□ -0.94
SSB-207ENST00000465871 TCEAL1Q15170 157 aa9.2□□□□□ -0.94
SSB-207ENST00000465871 HAUS7Q99871 368 aa9.2□□□□□ -0.94
SSB-207ENST00000465871 NOL6Q9H6R4 1146 aaKnown RBP9.2□□□□□ -0.94
SSB-207ENST00000465871 TNFRSF12AQ9NP84 129 aa9.2□□□□□ -0.94
SSB-207ENST00000465871 A0A087WZG4 1122 aa9.19□□□□□ -0.94
SSB-207ENST00000465871 FGF10O15520 208 aaPredicted RBP9.19□□□□□ -0.94
SSB-207ENST00000465871 NOP2P46087 812 aaKnown RBP9.19□□□□□ -0.94
SSB-207ENST00000465871 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
SSB-207ENST00000465871 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
SSB-207ENST00000465871 HLA-DQA1Q5Y7H0 255 aa9.19□□□□□ -0.94
SSB-207ENST00000465871 IRF2BPLQ9H1B7 796 aa9.19□□□□□ -0.94
SSB-207ENST00000465871 WHRNQ9P202 907 aa9.19□□□□□ -0.94
SSB-207ENST00000465871 RFXAPO00287 272 aa9.18□□□□□ -0.94
SSB-207ENST00000465871 TMEM62Q0P6H9 643 aa9.18□□□□□ -0.94
SSB-207ENST00000465871 GNPTABQ3T906 1256 aa9.18□□□□□ -0.94
SSB-207ENST00000465871 ZDHHC15Q96MV8 337 aa9.18□□□□□ -0.94
SSB-207ENST00000465871 CNTD2Q9H8S5 307 aa9.18□□□□□ -0.94
SSB-207ENST00000465871 A0A1W2PQH9 124 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 UNCXA6NJT0 531 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 CD3EP07766 207 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 NASPP49321 788 aaPredicted RBP9.17□□□□□ -0.94
SSB-207ENST00000465871 POU4F1Q01851 419 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 ZNF385BQ569K4 471 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 SHDQ96IW2 340 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 SIGLEC10Q96LC7 697 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 FCRL3Q96P31 734 aaPredicted RBP9.17□□□□□ -0.94
SSB-207ENST00000465871 KLHL25Q9H0H3 589 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 KLHL14Q9P2G3 628 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 DIS3Q9Y2L1 958 aaKnown RBP9.17□□□□□ -0.94
SSB-207ENST00000465871 KCTD3Q9Y597 815 aa9.17□□□□□ -0.94
SSB-207ENST00000465871 N4BP3O15049 544 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 IFNGR1P15260 489 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 EPHB3P54753 998 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 SSPNQ14714 243 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 JAMLQ86YT9 394 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 GBP3Q9H0R5 595 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 IRAK3Q9Y616 596 aa9.16□□□□□ -0.94
SSB-207ENST00000465871 A0A1W2PQ27 194 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 A0A1W2PQ64 194 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 A0A1W2PQC6 194 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 A0A1W2PQD8 194 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 NUDT19A8MXV4 375 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 MVKQ03426 396 aa9.15□□□□□ -0.94
SSB-207ENST00000465871 HEATR6Q6AI08 1181 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms